RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SERPINB11Q96P15 392 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 LENG8Q96PV6 779 aaPredicted RBP18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 FBXO44Q9H4M3 255 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 ZNF696Q9H7X3 374 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 TCF7L2Q9NQB0 619 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 LZTS1Q9Y250 596 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 OR6C75A6NL08 312 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 HSPA13P48723 471 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 ADGRE1Q14246 886 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 KYQ8NBH2 561 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 SPATA22Q8NHS9 363 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 CERS2Q96G23 380 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 TTPALQ9BTX7 342 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 VN1R3Q9BXE9 311 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 MAN1C1Q9NR34 630 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 UBAP1Q9NZ09 502 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 RGSL1A5PLK6 1076 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 TBC1D4O60343 1298 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 TPH1P17752 444 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 NUDT2P50583 147 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 TBX4P57082 545 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 GPR17Q13304 367 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 PPP2R5DQ14738 602 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 SETD3Q86TU7 594 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 VWCEQ96DN2 955 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 RBBP8Q99708 897 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 CCSER2Q9H7U1 834 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 SAGE1Q9NXZ1 904 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 CCDC78A2IDD5 438 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 CRTAMO95727 393 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 MPOP05164 745 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 ATF6P18850 670 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 PIK3R1P27986 724 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 SPRP35270 261 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 MAGEA11P43364 429 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 RANBP1P43487 201 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 HK2P52789 917 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 BNC2Q6ZN30 1099 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 TICAM1Q8IUC6 712 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 DCLK2Q8N568 766 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 DNAAF3Q8N9W5 541 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 TDRD5Q8NAT2 981 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 RP9Q8TA86 221 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 SLC39A13Q96H72 371 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 TEKT5Q96M29 485 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 GBA3Q9H227 469 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 ZNF358Q9NW07 568 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 RAD54BQ9Y620 910 aa18.47■□□□□ 0.55
PDLIM3-201ENST00000284767 G3V2L1 256 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 CNTN5O94779 1100 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 AP2A1O95782 977 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 MT-CYBP00156 380 aaPredicted RBP18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 ERVK-10P10266 1014 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 MLLT6P55198 1093 aaPredicted RBP18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 FLOT2Q14254 428 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 USP41Q3LFD5 358 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 C10orf120Q5SQS8 335 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 CERCAMQ5T4B2 595 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 ATPAF2Q8N5M1 289 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 MAPK15Q8TD08 544 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 DLG3Q92796 817 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 FCRL3Q96P31 734 aaPredicted RBP18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 OXCT2Q9BYC2 517 aaPredicted RBP18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 RIMS3Q9UJD0 308 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 DMTF1Q9Y222 760 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 TLR6Q9Y2C9 796 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 AP4B1Q9Y6B7 739 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 PLXNA3P51805 1871 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 AIM2O14862 343 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 TRIM13O60858 407 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 CXCL10P02778 98 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 HOXC13P31276 330 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 LIMK2P53671 638 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 NADK2Q4G0N4 442 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 ALFQ53S48 1182 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 KCTD11Q693B1 232 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 KLHDC10Q6PID8 442 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 NAPRTQ6XQN6 538 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 CMC1Q7Z7K0 106 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 CIR1Q86X95 450 aaPredicted RBP18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 DSELQ8IZU8 1212 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 TNS4Q8IZW8 715 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 STON2Q8WXE9 905 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 OR52B2Q96RD2 323 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 RBM38Q9H0Z9 239 aaKnown RBP18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 IRAK4Q9NWZ3 460 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 IL37Q9NZH6 218 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 ATP11BQ9Y2G3 1177 aa18.46■□□□□ 0.55
PDLIM3-201ENST00000284767 NYNRINQ9P2P1 1898 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 MAFKO60675 156 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 ADSLP30566 484 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 SERPINB5P36952 375 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 CREB5Q02930 508 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 ZNF423Q2M1K9 1284 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 PIGGQ5H8A4 983 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 MS4A13Q5J8X5 152 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 CLEC14AQ86T13 490 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 SNX32Q86XE0 403 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms