RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 HPS1Q92902 700 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 TMEM176AQ96HP8 235 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ERMAPQ96PL5 475 aaPredicted RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 CHMP1AQ9HD42 196 aaPredicted RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 CISHQ9NSE2 258 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PRR12Q9ULL5 1215 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ACTL7BQ9Y614 415 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 FAM240BA0A1B0GVZ2 78 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CYP17A1P05093 508 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CYP11B2P19099 503 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 DCKP27707 260 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SLC7A2P52569 658 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SCN1BQ07699 218 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 BCL2L1Q07817 233 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ABCA11PQ4W5N1 156 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 DGLUCYQ7Z3D6 616 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SEPT12Q8IYM1 358 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 OR4A15Q8NGL6 344 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 GRPEL2Q8TAA5 225 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CXorf40BQ96DE9 158 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ALG9Q9H6U8 611 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CDH7Q9ULB5 785 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PCDHB5Q9Y5E4 795 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 DHRS12A0PJE2 317 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CHADO15335 359 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 FSBPO95073 299 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 FBXO47Q5MNV8 452 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PIK3R6Q5UE93 754 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 RTL4Q6ZR62 310 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SGCDQ92629 289 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 DPF2Q92785 391 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 C2orf49Q9BVC5 232 aaPredicted RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 ZDHHC6Q9H6R6 413 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 KCNIP3Q9Y2W7 256 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ORC5O43913 435 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CBX6O95503 412 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CYB5AP00167 134 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PAX3P23760 479 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ACAT1P24752 427 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 MGAT1P26572 445 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PPP3R1P63098 170 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ROR2Q01974 943 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 HDAC7Q8WUI4 952 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SEMA4BQ9NPR2 832 aaPredicted RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 TRPS1Q9UHF7 1281 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CCL15-CCL14A0A0B4J2E2 113 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 AKAP8O43823 692 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 C9P02748 559 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CYP4B1P13584 511 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CCL15Q16663 113 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 METTL3Q86U44 580 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 ZNF567Q8N184 647 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CDYL2Q8N8U2 506 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ARRDC4Q8NCT1 418 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 MAP3K4Q9Y6R4 1608 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PRAMEF22A3QJZ6 481 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 QSOX1O00391 747 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SH3BGRLO75368 114 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 FDPSP14324 419 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 HTR1BP28222 390 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 GJA8P48165 433 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 S100A12P80511 92 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 LIPEQ05469 1076 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 MAPKAPK3Q16644 382 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 GRHL2Q6ISB3 625 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ANO7Q6IWH7 933 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PLCZ1Q86YW0 608 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SUN5Q8TC36 379 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ELOVL4Q9GZR5 314 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ATXN10Q9UBB4 475 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SDK1Q7Z5N4 2213 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SNRPB2P08579 225 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 FAM228BP0C875 321 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 TFPIP10646 304 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 AMD1P17707 334 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ST3GAL1Q11201 340 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ADAMTSL2Q86TH1 951 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 LGI2Q8N0V4 545 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 FUT8Q9BYC5 575 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 MFSD1Q9H3U5 465 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 EMC3Q9P0I2 261 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CPS1P31327 1500 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 KPNA3O00505 521 aaPredicted RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 PAPSS2O95340 614 aaPredicted RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 CYP2B6P20813 491 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ADAM8P78325 824 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CNSTQ6PJW8 725 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 GPRIN3Q6ZVF9 776 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 RNF148Q8N7C7 305 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 RFKQ969G6 155 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PRRG4Q9BZD6 226 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SEMA3GQ9NS98 782 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 TPP1O14773 563 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ENTPD3O75355 529 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 VAPBO95292 243 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 OTCP00480 354 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 GSTT2BP0CG30 244 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 MECP2P51608 486 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 IRF8Q02556 426 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms