RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 DENND5BQ6ZUT9 1274 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 GGT7Q9UJ14 662 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 ZNF225Q9UK10 706 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 ZNF638Q14966 1978 aaKnown RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 H3BM21 787 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 TLX3O43711 291 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 SEC22BO75396 215 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 SLC35G4P0C7Q5 338 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 COILP38432 576 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 OLFML2AQ68BL7 652 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 CYP4V2Q6ZWL3 525 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 ATCAYQ86WG3 371 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 HCAR2Q8TDS4 363 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 ACOT12Q8WYK0 555 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 MAGEB18Q96M61 343 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 NEDD4LQ96PU5 975 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 ROBO2Q9HCK4 1378 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 CDC42P60953 191 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 PSMD5Q16401 504 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 ATAD3CQ5T2N8 411 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 GAS2L3Q86XJ1 694 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 HJURPQ8NCD3 748 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 SENP6Q9GZR1 1112 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 TMEM39BQ9GZU3 492 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 ELL3Q9HB65 397 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 TCF7L2Q9NQB0 619 aa13.35□□□□□ -0.27
PRDM16-201ENST00000270722 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
PRDM16-201ENST00000270722 NPIPA7E9PJI5 369 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 NPIPA8P0DM63 369 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 DCKP27707 260 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 C6orf183Q5T699 404 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 LPCAT1Q8NF37 534 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 ZSWIM1Q9BR11 485 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 CES2O00748 559 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 ETV5P41161 510 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 SLC25A23Q9BV35 468 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 MARCH2Q9P0N8 246 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 MUSKO15146 869 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 MMP13P45452 471 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 FAM76BQ5HYJ3 339 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 TRIM40Q6P9F5 258 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 PHYKPLQ8IUZ5 450 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 BRSK2Q8IWQ3 736 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 ZHX1-C8orf76Q96EF9 292 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 GAL3ST1Q99999 423 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 POLR3BQ9NW08 1133 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 KLK14Q9P0G3 267 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 MLYCDO95822 493 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 MLLT6P55198 1093 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 CBWD6Q4V339 395 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 SLC4A9Q96Q91 983 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 IL22Q9GZX6 179 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 DDX43Q9NXZ2 648 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 KCNE2Q9Y6J6 123 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 ZNF780BQ9Y6R6 833 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 TEX33O43247 280 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 CPA3P15088 417 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 NDUFV1P49821 464 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 FSCN1Q16658 493 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 ERCC2P18074 760 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 PTPN4P29074 926 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 CLCN2P51788 898 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 GNG2P59768 71 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 SMAD1Q15797 465 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 KIAA1324Q6UXG2 1013 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 GPSM1Q86YR5 675 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 DCUN1D5Q9BTE7 237 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 KMOO15229 486 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 VARSP26640 1264 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 HK2P52789 917 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 OR10H5Q8NGA6 315 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 UNKQ9C0B0 810 aaKnown RBP13.34□□□□□ -0.27
PRDM16-201ENST00000270722 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 SNCAIPQ9Y6H5 919 aa13.34□□□□□ -0.27
PRDM16-201ENST00000270722 C9IYK1 514 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.27
PRDM16-201ENST00000270722 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.27
PRDM16-201ENST00000270722 GRIK4Q16099 956 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 AP5B1Q2VPB7 878 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 DENND5AQ6IQ26 1287 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 USP50Q70EL3 339 aaPredicted RBP13.33□□□□□ -0.27
PRDM16-201ENST00000270722 C4orf19Q8IY42 314 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 STAG3L4Q8TBR4 150 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 OR8D1Q8WZ84 308 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 C1QTNF1Q9BXJ1 281 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 IRF2BPLQ9H1B7 796 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.27
PRDM16-201ENST00000270722 NRCAMQ92823 1304 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 CD163L1Q9NR16 1453 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 DNTTP04053 509 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 CD53P19397 219 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 TFE3P19532 575 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms