RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 AURKCQ9UQB9 309 aa27.7■■■□□ 2.03
CBX4-201ENST00000269397 TDRKHQ9Y2W6 561 aaKnown RBP27.7■■■□□ 2.03
CBX4-201ENST00000269397 SCN4AP35499 1836 aa27.7■■■□□ 2.03
CBX4-201ENST00000269397 C9JVG2 144 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 TMX2-CTNND1H3BSU7 103 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 PMPCBO75439 489 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 CD4P01730 458 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 NOMO2Q5JPE7 1267 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 CPNE9Q8IYJ1 553 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 PPTC7Q8NI37 304 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 NTAN1Q96AB6 310 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 WDCPQ9H6R7 721 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 CROTQ9UKG9 612 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 GMEB1Q9Y692 573 aa27.7■■■□□ 2.02
CBX4-201ENST00000269397 A0A0G2JLL6 359 aaPredicted RBP27.69■■■□□ 2.02
CBX4-201ENST00000269397 PSMD8P48556 350 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 CCNA1P78396 465 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 NHSL2Q5HYW2 709 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 PRRT2Q7Z6L0 340 aaPredicted RBP27.69■■■□□ 2.02
CBX4-201ENST00000269397 CLVS1Q8IUQ0 354 aaPredicted RBP27.69■■■□□ 2.02
CBX4-201ENST00000269397 SLC9A7Q96T83 725 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 SIK2Q9H0K1 926 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 IGSF5Q9NSI5 407 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 RRN3Q9NYV6 651 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 FAF1Q9UNN5 650 aaPredicted RBP27.69■■■□□ 2.02
CBX4-201ENST00000269397 PIN4Q9Y237 131 aaKnown RBP27.69■■■□□ 2.02
CBX4-201ENST00000269397 TIMM13Q9Y5L4 95 aaPredicted RBP27.69■■■□□ 2.02
CBX4-201ENST00000269397 TSC2P49815 1807 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 A8MT66 165 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 ATP6V1B2P21281 511 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 DAOAP59103 153 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 DHFR2Q86XF0 187 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 ZNF786Q8N393 782 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 PBXIP1Q96AQ6 731 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 OLFM1Q99784 485 aa27.69■■■□□ 2.02
CBX4-201ENST00000269397 CLK4Q9HAZ1 481 aaKnown RBP27.69■■■□□ 2.02
CBX4-201ENST00000269397 NRCAMQ92823 1304 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 NRP2O60462 931 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 BTBD8Q5XKL5 378 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 LINC00523Q86TU6 105 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 MTF2Q9Y483 593 aaPredicted RBP27.68■■■□□ 2.02
CBX4-201ENST00000269397 H0YJX3 145 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 SRP72O76094 671 aaKnown RBP27.68■■■□□ 2.02
CBX4-201ENST00000269397 CD151P48509 253 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 ENTPD1P49961 510 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 SCAPQ12770 1279 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 ARL13BQ3SXY8 428 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 DENND5AQ6IQ26 1287 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 IRGQQ8WZA9 623 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 VAT1Q99536 393 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 MEAF6Q9HAF1 191 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 IPO11Q9UI26 975 aaKnown RBP27.68■■■□□ 2.02
CBX4-201ENST00000269397 RAD54BQ9Y620 910 aa27.68■■■□□ 2.02
CBX4-201ENST00000269397 CTBSQ01459 385 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 CNTN4Q8IWV2 1026 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 CBR4Q8N4T8 237 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 KCTD13Q8WZ19 329 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 RANBP9Q96S59 729 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 RHOBTB2Q9BYZ6 727 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 ANKRD60Q9BZ19 345 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 MRPL40Q9NQ50 206 aaKnown RBP27.67■■■□□ 2.02
CBX4-201ENST00000269397 TMEM181Q9P2C4 612 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 GIMAP2Q9UG22 337 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 EGFL7Q9UHF1 273 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 FBXO5Q9UKT4 447 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 TNS1Q9HBL0 1735 aaKnown RBP27.67■■■□□ 2.02
CBX4-201ENST00000269397 CLIC3O95833 236 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 HNRNPCP07910 306 aaKnown RBP eCLIP27.67■■■□□ 2.02
CBX4-201ENST00000269397 CPB1P15086 417 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 TRAP1Q12931 704 aaKnown RBP27.67■■■□□ 2.02
CBX4-201ENST00000269397 MAPRE2Q15555 327 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 SV2CQ496J9 727 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 TRIM74Q86UV6 250 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 TRIM73Q86UV7 250 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 PPHLN1Q8NEY8 458 aaKnown RBP27.67■■■□□ 2.02
CBX4-201ENST00000269397 STON2Q8WXE9 905 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 DPF3Q92784 378 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 RNF34Q969K3 372 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 FAM210AQ96ND0 272 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 TRIM8Q9BZR9 551 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 GPRC5DQ9NZD1 345 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 SARDHQ9UL12 918 aa27.67■■■□□ 2.02
CBX4-201ENST00000269397 ADM5C9JUS6 153 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 UBFD1O14562 309 aaKnown RBP27.66■■■□□ 2.02
CBX4-201ENST00000269397 YBX1P67809 324 aaKnown RBP27.66■■■□□ 2.02
CBX4-201ENST00000269397 FAM83EQ2M2I3 478 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 SMOQ99835 787 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 EFHD1Q9BUP0 239 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 CRTAC1Q9NQ79 661 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 CDC14AQ9UNH5 594 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 ASB14A6NK59 587 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 GPR32O75388 356 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 IPO13O94829 963 aaKnown RBP27.66■■■□□ 2.02
CBX4-201ENST00000269397 HCAR3P49019 387 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 MAP7D1Q3KQU3 841 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 TECRLQ5HYJ1 363 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 SAMD4BQ5PRF9 694 aaKnown RBP27.66■■■□□ 2.02
CBX4-201ENST00000269397 RETREG3Q86VR2 466 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 ARRDC4Q8NCT1 418 aa27.66■■■□□ 2.02
CBX4-201ENST00000269397 TMEM40Q8WWA1 233 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms