RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 AREL1O15033 823 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 RNGTTO60942 597 aaKnown RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 SOCS5O75159 536 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 PCDH8O95206 1070 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 PRLP01236 227 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 IGHV4-34P06331 123 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 SERPINF2P08697 491 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 CES1P23141 567 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ITPKAP23677 461 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 MAT2AP31153 395 aaKnown RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 GDF10P55107 478 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 CCDC15Q0P6D6 951 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 OASLQ15646 514 aaKnown RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 UGP2Q16851 508 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 KCTD19Q17RG1 926 aaPredicted RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 HS1BP3Q53T59 392 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ANKRD20A2Q5SQ80 823 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 CFAP58Q5T655 872 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ANKRD20A1Q5TYW2 823 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ANKRD20A3Q5VUR7 823 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ASCL5Q7RTU5 278 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 PAF1Q8N7H5 531 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 CCDC110Q8TBZ0 833 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 KLK6Q92876 244 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 TADA1Q96BN2 335 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 BIRC7Q96CA5 298 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 VAT1Q99536 393 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 EBF2Q9HAK2 575 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 PCDH12Q9NPG4 1184 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 UBP1Q9NZI7 540 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ZFR2Q9UPR6 939 aaKnown RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 ZKSCAN5Q9Y2L8 839 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 PCDHB9Q9Y5E1 797 aa12.86□□□□□ -0.35
SS18-202ENST00000269138 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
SS18-202ENST00000269138 A0A1W2PQU0 124 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 MEI4A8MW99 385 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 AP1G1O43747 822 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 FZD6O60353 706 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 PGLSO95336 258 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 XPAP23025 273 aaPredicted RBP12.85□□□□□ -0.35
SS18-202ENST00000269138 CREB5Q02930 508 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 CCDC6Q16204 474 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 CCNG2Q16589 344 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 SPDYCQ5MJ68 293 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 ARMC12Q5T9G4 340 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 LYSMD4Q5XG99 296 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 SEL1L3Q68CR1 1132 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 LAIR1Q6GTX8 287 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 KDELC2Q7Z4H8 507 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 PRUNE1Q86TP1 453 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 PIH1D2Q8WWB5 315 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 SNX19Q92543 992 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 PIGKQ92643 395 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 FOXJ1Q92949 421 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 RAB7BQ96AH8 199 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 TRIM44Q96DX7 344 aaPredicted RBP12.85□□□□□ -0.35
SS18-202ENST00000269138 OXNAD1Q96HP4 312 aaPredicted RBP12.85□□□□□ -0.35
SS18-202ENST00000269138 SPATA13Q96N96 652 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 AP1M1Q9BXS5 423 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 FRMD8P1Q9BZ68 369 aaPredicted RBP12.85□□□□□ -0.35
SS18-202ENST00000269138 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 ARRDC1-AS1Q9H2J1 176 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 PREBQ9HCU5 417 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 TMEM74BQ9NUR3 256 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 EIF2B4Q9UI10 523 aaKnown RBP12.85□□□□□ -0.35
SS18-202ENST00000269138 TRHDEQ9UKU6 1024 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 TTC7AQ9ULT0 858 aaPredicted RBP12.85□□□□□ -0.35
SS18-202ENST00000269138 THADAQ6YHU6 1953 aa12.85□□□□□ -0.35
SS18-202ENST00000269138 GON4LQ3T8J9 2241 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 C5orf60A6NFR6 353 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 A8MX80 341 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 NEMP1O14524 444 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 RIOK3O14730 519 aaKnown RBP12.84□□□□□ -0.35
SS18-202ENST00000269138 PMPCBO75439 489 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 EPN2O95208 641 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 CPP00450 1065 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 CTPS1P17812 591 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 TCP1P17987 556 aaKnown RBP12.84□□□□□ -0.35
SS18-202ENST00000269138 KCNJ1P48048 391 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 CCR5P51681 352 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 ETF1P62495 437 aaKnown RBP12.84□□□□□ -0.35
SS18-202ENST00000269138 FAM193AP78312 1265 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 PCSK7Q16549 785 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 ZNF284Q2VY69 593 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 CYP2U1Q7Z449 544 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 HORMAD1Q86X24 394 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 RGL4Q8IZJ4 473 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 DCLK2Q8N568 766 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 ACTRT1Q8TDG2 376 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms