RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PBX3P40426 434 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 LBX1P52954 281 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GPNMBQ14956 572 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 KRT80Q6KB66 452 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DBF4BQ8NFT6 615 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZNF670Q9BS34 389 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 C11orf84Q9BUA3 381 aaPredicted RBP16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SAGE1Q9NXZ1 904 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CDC14AQ9UNH5 594 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MYRFQ9Y2G1 1151 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PCDHB12Q9Y5F1 795 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 H3BNH8 94 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 NBNO60934 754 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CAPNS1P04632 268 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ME2P23368 584 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TYK2P29597 1187 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PTPN9P43378 593 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SNX16P57768 344 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RAB15P59190 212 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 METTL21CQ5VZV1 264 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TP53INP2Q8IXH6 220 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MCUQ8NE86 351 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 LINC01599Q8WXQ3 324 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ITPKCQ96DU7 683 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RTP4Q96DX8 246 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TNIP3Q96KP6 325 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TPK1Q9H3S4 243 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 FAM124BQ9H5Z6 455 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 WDR41Q9HAD4 459 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PAK6Q9NQU5 681 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 OLAHQ9NV23 265 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 BCAP29Q9UHQ4 241 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SOBPA7XYQ1 873 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CAPN15O75808 1086 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 BCAS2O75934 225 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CYP2C18P33260 490 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MAGEA6P43360 314 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TXNL4AP83876 142 aaKnown RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ARHGEF6Q15052 776 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DPYSL2Q16555 572 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CLPPQ16740 277 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CMC1Q7Z7K0 106 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GPR180Q86V85 440 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZDHHC17Q8IUH5 632 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TDRD5Q8NAT2 981 aaKnown RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CENPIQ92674 756 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RMND5BQ96G75 393 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RHOBTB2Q9BYZ6 727 aa16.1■□□□□ 0.17
MAP1LC3B-201ENST00000268607 J3QRK9 145 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PLOD2O00469 737 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 F7P08709 466 aaPredicted RBP16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 UGT1A6P19224 532 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 UGT1A1P22309 533 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 UGT1A4P22310 534 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 UGT1A3P35503 534 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 UGT1A5P35504 534 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PNPLA4P41247 253 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 BRCC3P46736 316 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CYP2A13Q16696 494 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 XKR4Q5GH76 650 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DEPDC1Q5TB30 811 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SMYD5Q6GMV2 418 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CARM1Q86X55 608 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZNF280BQ86YH2 543 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 FBXL8Q96CD0 374 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TMA16Q96EY4 203 aaKnown RBP16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MARK4Q96L34 752 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DUSP16Q9BY84 665 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 LRRC4Q9HBW1 653 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DTLQ9NZJ0 730 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GIT1Q9Y2X7 761 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MYBPHLA2RUH7 354 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 M0QYT0 321 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 NRP1O14786 923 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ATE1O95260 518 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 THP07101 528 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MX2P20592 715 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 NIPAL4Q0D2K0 466 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 LSM12Q3MHD2 195 aaKnown RBP16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CCDC153Q494R4 210 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PLD6Q8N2A8 252 aaKnown RBP16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 LRTOMTQ8WZ04 291 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 STARD8Q92502 1023 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DLG3Q92796 817 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ATXN7L3BQ96GX2 97 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SENP8Q96LD8 212 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZNF597Q96LX8 424 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TMEM30AQ9NV96 361 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SQORQ9Y6N5 450 aa16.09■□□□□ 0.17
MAP1LC3B-201ENST00000268607 BCLAF3A2AJT9 711 aaKnown RBP16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ACOT8O14734 319 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CABYRO75952 493 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MATKP42679 507 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 C1QTNF8P60827 252 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 IKBKEQ14164 716 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 BSPRYQ5W0U4 402 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 EGFLAMQ63HQ2 1017 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TMEM198Q66K66 360 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms