RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ISL2Q96A47 359 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 ACDQ96AP0 544 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 RMDN1Q96DB5 314 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 ELAC2Q9BQ52 826 aaKnown RBP11.65□□□□□ -0.54
SCAF11-201ENST00000266589 VPS11Q9H270 941 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 RHOJQ9H4E5 214 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 TLE6Q9H808 572 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.65□□□□□ -0.549e-6■■■■□ 19.7
SCAF11-201ENST00000266589 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
SCAF11-201ENST00000266589 KCTD3Q9Y597 815 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 PCDHGC4Q9Y5F7 938 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 RAI2Q9Y5P3 530 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 ARL5AQ9Y689 179 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 CCL22O00626 93 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 GLRA3O75311 464 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 AHSGP02765 367 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 POU2F2P09086 479 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 MAGEA12P43365 314 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 SERPINB4P48594 390 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 NSUN2Q08J23 767 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 USP4Q13107 963 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 LAMB3Q13751 1172 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 CBX2Q14781 532 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 GRM3Q14832 879 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PLEKHG6Q3KR16 790 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ATXN7L2Q5T6C5 722 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 NEPROQ6NW34 567 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 NCEH1Q6PIU2 408 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 FAM47EQ6ZV65 393 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PIGWQ7Z7B1 504 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 TMEM25Q86YD3 366 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 C12orf76Q8N812 135 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 C2CD4AQ8NCU7 369 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 BRSK1Q8TDC3 778 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 SMG7Q92540 1137 aaKnown RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ZNF75CPQ92670 426 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PBX4Q9BYU1 374 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 MRPS23Q9Y3D9 190 aaKnown RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 NUP210Q8TEM1 1887 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 NEDD8-MDP1E9PL57 170 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PRLP01236 227 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PDHA1P08559 390 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 GABRB3P28472 473 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 NRIP1P48552 1158 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ARSDP51689 593 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PRAMEP78395 509 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 TRAF2Q12933 501 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ARID3BQ8IVW6 561 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ARMC2Q8NEN0 867 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ACVR1CQ8NER5 493 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 LPCAT1Q8NF37 534 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 CALML6Q8TD86 181 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 GDPD5Q8WTR4 605 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PDCD6IPQ8WUM4 868 aaKnown RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 GPR22Q99680 433 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 BBS2Q9BXC9 721 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 PITPNM3Q9BZ71 974 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 TM6SF2Q9BZW4 377 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 NKX2-4Q9H2Z4 354 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 SLCO1B3Q9NPD5 702 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ABCB8Q9NUT2 735 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 DCDC2Q9UHG0 476 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 INTS6Q9UL03 887 aaKnown RBP11.64□□□□□ -0.55
SCAF11-201ENST00000266589 SLC39A10Q9ULF5 831 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 MYOFQ9NZM1 2061 aa11.64□□□□□ -0.55
SCAF11-201ENST00000266589 SLC7A4O43246 635 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SMAD6O43541 496 aaKnown RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 BUD23O43709 281 aaKnown RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 PENKP01210 267 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 NEFHP12036 1026 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 HLA-FP30511 346 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 GMPRP36959 345 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 PLK1P53350 603 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 TMPRSS15P98073 1019 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 DLG2Q15700 870 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 DUSP6Q16828 381 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 PITRM1Q5JRX3 1037 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 N4BP2L1Q5TBK1 243 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 CGB2Q6NT52 195 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 TMC5Q6UXY8 1006 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SRLQ86TD4 932 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 OTUD6BQ8N6M0 293 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 CCDC197Q8NCU1 140 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 OR6P1Q8NGX9 317 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 GABPB2Q8TAK5 448 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 ITFG1Q8TB96 612 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 PEX13Q92968 403 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 IRF7Q92985 503 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 HDAC10Q969S8 669 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 DNAJC1Q96KC8 554 aaKnown RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 CABS1Q96KC9 395 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 ADGRE3Q9BY15 652 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 MANSC1Q9H8J5 431 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 TBC1D14Q9P2M4 693 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 FBXO5Q9UKT4 447 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms