RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PCDHGA7Q9Y5G6 932 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 COMMD3-BMI1R4GMX3 469 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CROCCQ5TZA2 2017 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 NR5A2O00482 541 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 TADA2AO75478 443 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 NCF1P14598 390 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 WARSP23381 471 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 CD151P48509 253 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 RPL34P49207 117 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 ECT2LQ008S8 904 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CBLBQ13191 982 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 DYNC1I2Q13409 638 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 MAP7Q14244 749 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 LRRC23Q53EV4 343 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 REP15Q6BDI9 236 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 DENND5AQ6IQ26 1287 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 TLK2Q86UE8 772 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 HERC6Q8IVU3 1022 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 SPPL2BQ8TCT7 592 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 DGCR14Q96DF8 476 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 FCRL2Q96LA5 508 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 CCT7Q99832 543 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 SOX17Q9H6I2 414 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 GLOD4Q9HC38 313 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 EPS15L1Q9UBC2 864 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 ARHGEF37A1IGU5 675 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 A8MT66 165 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 J3KR12 359 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 UBFD1O14562 309 aaKnown RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 ACOT8O14734 319 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 XPOTO43592 962 aaKnown RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 TSPAN3O60637 253 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 GNAO1P09471 354 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 PSMC3P17980 439 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 CD86P42081 329 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 FUT11Q495W5 492 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 VPS26BQ4G0F5 336 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 KRT80Q6KB66 452 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 LRRTM3Q86VH5 581 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 DDIASQ8IXT1 998 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 SNRNP27Q8WVK2 155 aaKnown RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 ESAMQ96AP7 390 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 CYP2S1Q96SQ9 504 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 KIFC1Q9BW19 673 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 TRHDEQ9UKU6 1024 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 PRPF19Q9UMS4 504 aaKnown RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 A0A0U1RQS6 177 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 MAGEB16A2A368 324 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 TARM1B6A8C7 271 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 TMX2-CTNND1H3BSU7 103 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 MRASO14807 208 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 MAGEB3O15480 346 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 BCAS2O75934 225 aaPredicted RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 ITGB1P05556 798 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 PRDX6P30041 224 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 ARCN1P48444 511 aaKnown RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 ARSDP51689 593 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 WNT3AP56704 352 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 SPPL2CQ8IUH8 684 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 NUP93Q8N1F7 819 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 MARVELD2Q8N4S9 558 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 TOP6BLQ8N6T0 577 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 CASP10Q92851 521 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 ISL2Q96A47 359 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 NSUN5Q96P11 429 aaKnown RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 BTBD9Q96Q07 612 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 DCUN1D5Q9BTE7 237 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 CACNA2D2Q9NY47 1150 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 MARCH4Q9P2E8 410 aaPredicted RBP9.19□□□□□ -0.94
MSH4-201ENST00000263187 RNF11Q9Y3C5 154 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 ACTL7AQ9Y615 435 aa9.19□□□□□ -0.94
MSH4-201ENST00000263187 TBX18O95935 607 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 LRPAP1P30533 357 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 GRIK1P39086 918 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 GALK1P51570 392 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 APLP1P51693 650 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 CDKN2DP55273 166 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 FOXA1P55317 472 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 DSC2Q02487 901 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 TMED1Q13445 227 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 MAP7D1Q3KQU3 841 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 ARHGAP12Q8IWW6 846 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 TMEM102Q8N9M5 508 aaPredicted RBP9.18□□□□□ -0.94
MSH4-201ENST00000263187 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 CANT1Q8WVQ1 401 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 HDAC10Q969S8 669 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 CNDP1Q96KN2 507 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SMIM14Q96QK8 99 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 IGSF5Q9NSI5 407 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 FLRT1Q9NZU1 646 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 TCAF1Q9Y4C2 921 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 COL1A2P08123 1366 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 RRN3P2A6NIE6 340 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 NCAM2O15394 837 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 MAFKO60675 156 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 TNFAIP8O95379 198 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 THP07101 528 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms