RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CXorf51AA0A1B0GTR3 108 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 CTSLP07711 333 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 SERPINF2P08697 491 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 CCINQ13939 588 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 HNRNPA1L2Q32P51 320 aaKnown RBP27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 METTL3Q86U44 580 aaKnown RBP27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 STK40Q8N2I9 435 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 SLC25A41Q8N5S1 370 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 IL17RCQ8NAC3 791 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 ANXA9O76027 345 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 PDHA1P08559 390 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 FAM153BP0C7A2 387 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 TARSP26639 723 aaKnown RBP27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 GEMP55040 296 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 MORF4L2Q15014 288 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 PTPRRQ15256 657 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 FAM153CQ494X1 144 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 HP1BP3Q5SSJ5 553 aaPredicted RBP27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 C9orf64Q5T6V5 341 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 ZNF852Q6ZMS4 543 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 Q6ZS52 159 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 OR52K1Q8NGK4 314 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 SLC8A2Q9UPR5 921 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 AAR2Q9Y312 384 aaKnown RBP27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 RAI2Q9Y5P3 530 aa27.74■■■□□ 2.03
SMARCD3-201ENST00000262188 EIF3HO15372 352 aaKnown RBP eCLIP27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 KLF8O95600 359 aaPredicted RBP27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 GSRP00390 522 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 HNRNPLP14866 589 aaKnown RBP eCLIP27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 MAGEA6P43360 314 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 GALNT3Q14435 633 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 FNBP1LQ5T0N5 605 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 CACUL1Q86Y37 369 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 TXNDC5Q8NBS9 432 aaKnown RBP27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 KLC4Q9NSK0 619 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 WNT16Q9UBV4 365 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 ADAM23O75077 832 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 TPSB2P20231 275 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 ADRA1AP35348 466 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 VASPP50552 380 aaPredicted RBP27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 METAP1P53582 386 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 UBXN2BQ14CS0 331 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 TPSAB1Q15661 275 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 MSS51Q4VC12 460 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 CCNI2Q6ZMN8 369 aaPredicted RBP27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 KLHDC8BQ8IXV7 354 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 RPLP0P6Q8NHW5 317 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 FSD1LQ9BXM9 530 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 SLC24A3Q9HC58 644 aa27.73■■■□□ 2.03
SMARCD3-201ENST00000262188 SNUPNO95149 360 aaKnown RBP27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 TPH1P17752 444 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 SLC8A1P32418 973 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 RECQLP46063 649 aaPredicted RBP27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 MPP3Q13368 585 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 CUL1Q13616 776 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 DENND2CQ68D51 928 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 KIAA1211LQ6NV74 962 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 PCGF5Q86SE9 256 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 CAND1Q86VP6 1230 aaKnown RBP27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 ZNF687Q8N1G0 1237 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 TBL1YQ9BQ87 522 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 PRSS16Q9NQE7 514 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 HAUS2Q9NVX0 235 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 SHOC2Q9UQ13 582 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 WASF2Q9Y6W5 498 aa27.72■■■□□ 2.03
SMARCD3-201ENST00000262188 UGT2B4P06133 528 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 CLNS1AP54105 237 aaKnown RBP27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 AP1S1P61966 158 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 ARSIQ5FYB1 569 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 CCDC25Q86WR0 208 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 ZSWIM9Q86XI8 627 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 SERPINB12Q96P63 405 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 TDRD1Q9BXT4 1180 aaKnown RBP27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 LRRC40Q9H9A6 602 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 CPSF2Q9P2I0 782 aaKnown RBP27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 SARDHQ9UL12 918 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 EDDM13A0A1B0GTR0 161 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 MAN2B1O00754 1011 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 LEFTY1O75610 366 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 PRLP01236 227 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 PRKCGP05129 697 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 CRADDP78560 199 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 CEP85LQ5SZL2 805 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 TLDC1Q6P9B6 456 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 HOOK3Q86VS8 718 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 AGGF1Q8N302 714 aaeCLIP27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 KDM1BQ8NB78 822 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 BBOF1Q8ND07 529 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 MSANTD3Q96H12 275 aa27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 EIF2B3Q9NR50 452 aaKnown RBP27.71■■■□□ 2.03
SMARCD3-201ENST00000262188 RASSF9O75901 435 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 POP4O95707 220 aaKnown RBP27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 CHRNB1P11230 501 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 CSNK1DP48730 415 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 SESN2P58004 480 aaPredicted RBP27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 PRKCQQ04759 706 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 ENPP2Q13822 863 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 LRRC73Q5JTD7 316 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 DENND5AQ6IQ26 1287 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms