RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 ALOXE3Q9BYJ1 711 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 TBC1D14Q9P2M4 693 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 KLHL3Q9UH77 587 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 VPS28Q9UK41 221 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 BCLAF3A2AJT9 711 aaKnown RBP16.63■□□□□ 0.25
VSX2-201ENST00000261980 ATG7O95352 703 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 ITGB6P18564 788 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 NSUN2Q08J23 767 aaKnown RBP eCLIP16.63■□□□□ 0.25
VSX2-201ENST00000261980 CYBRD1Q53TN4 286 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 REM2Q8IYK8 340 aaPredicted RBP16.63■□□□□ 0.25
VSX2-201ENST00000261980 CNTD1Q8N815 330 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 OR13F1Q8NGS4 319 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 TSNARE1Q96NA8 513 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 CTRCQ99895 268 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 ZNF518BQ9C0D4 1074 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 DTLQ9NZJ0 730 aa16.63■□□□□ 0.25
VSX2-201ENST00000261980 TRIM24O15164 1050 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 MSI1O43347 362 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 INMTO95050 263 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 GJB1P08034 283 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 IST1P53990 364 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 CTBP1Q13363 440 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 PGM5Q15124 567 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 PYCR3Q53H96 274 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 R3HCC1LQ7Z5L2 792 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 RETREG3Q86VR2 466 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 CDKL3Q8IVW4 592 aaPredicted RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 SEPT8Q92599 483 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 GLMNQ92990 594 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 ITCHQ96J02 903 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 DOK1Q99704 481 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 ARPC5LQ9BPX5 153 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 ELOVL4Q9GZR5 314 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 TRIT1Q9H3H1 467 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 ANKEF1Q9NU02 776 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 SLCO3A1Q9UIG8 710 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 UBIAD1Q9Y5Z9 338 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 C2CD4BA6NLJ0 364 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 TMEM114B3SHH9 223 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 TAF4O00268 1085 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 DGAT1O75907 488 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 MFN2O95140 757 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 BCAT1P54687 386 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 VBP1P61758 197 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 RACK1P63244 317 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 CCNA1P78396 465 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 GEN1Q17RS7 908 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 DUOXA2Q1HG44 320 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 KDM1BQ8NB78 822 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 NDNFQ8TB73 568 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 ZNF347Q96SE7 839 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 SLC30A1Q9Y6M5 507 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 NME4O00746 187 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 NADKO95544 446 aaPredicted RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 IL10P22301 178 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 PSMA4P25789 261 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 STX5Q13190 355 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 CLPPQ16740 277 aaPredicted RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 STXBP5Q5T5C0 1151 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 HHIPL2Q6UWX4 724 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 FAM131BQ86XD5 332 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 ANKRD13BQ86YJ7 626 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 ANKFN1Q8N957 763 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 ZNF280CQ8ND82 737 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 PTCD2Q8WV60 388 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 NDRG1Q92597 394 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 MAELQ96JY0 434 aaKnown RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 ZNF385DQ9H6B1 395 aa16.62■□□□□ 0.25
VSX2-201ENST00000261980 SMPD3Q9NY59 655 aaPredicted RBP16.62■□□□□ 0.25
VSX2-201ENST00000261980 FAM155AB1AL88 458 aaPredicted RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 ZNF701M0R085 212 aaPredicted RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 KPNA6O60684 536 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 ALDH1A2O94788 518 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 HTR1BP28222 390 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 SERPINB1P30740 379 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 SDC4P31431 198 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 LIMK2P53671 638 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 INSCQ1MX18 579 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 FBXO48Q5FWF7 155 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 RABL3Q5HYI8 236 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 GATAD2AQ86YP4 633 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 CPNE1Q99829 537 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 ZBED2Q9BTP6 218 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 VPS33BQ9H267 617 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 GDAP2Q9NXN4 497 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 GGA3Q9NZ52 723 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 SCHIP1Q9P0W5 487 aaPredicted RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 DSEQ9UL01 958 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 SNRPB2P08579 225 aaKnown RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 HSPA8P11142 646 aaKnown RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 BMP2P12643 396 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 BMPR1AP36894 532 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 CAPGP40121 348 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 RPS9P46781 194 aaKnown RBP16.61■□□□□ 0.25
VSX2-201ENST00000261980 MEP1AQ16819 746 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 CCDC81Q6ZN84 652 aa16.61■□□□□ 0.25
VSX2-201ENST00000261980 PRMT6Q96LA8 375 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms