RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 G3V2L1 256 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 SNPHO15079 494 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 FAM189A1O60320 539 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 SEC24AO95486 1093 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 GSRP00390 522 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 LAMTOR4Q0VGL1 99 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 LAPTM5Q13571 262 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 MOGQ16653 247 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 BROXQ5VW32 411 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 CLEC4DQ8WXI8 215 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 NTPCRQ9BSD7 190 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 MUC3BQ9H195 1237 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 TOR3AQ9H497 397 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 KIAA1551Q9HCM1 1747 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 MOCS2O96007 188 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 MPOP05164 745 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 STAG3L1P0CL83 205 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 VDRP11473 427 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 GLDCP23378 1020 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 GPD2P43304 727 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 SEMA5AQ13591 1074 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 GTF2H3Q13889 308 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 DEFB106AQ8N104 65 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 C1orf127Q8N9H9 656 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 PLEKHA5Q9HAU0 1116 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 SARS2Q9NP81 518 aaKnown RBP16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 MID1IP1Q9NPA3 183 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 PRDM8Q9NQV8 689 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 TMED5Q9Y3A6 229 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 UBA6A0AVT1 1052 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 PFDN6O15212 129 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 TBC1D4O60343 1298 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 GABBR2O75899 941 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 CLPXO76031 633 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 PABPC1P11940 636 aaKnown RBP16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 ZNF362Q5T0B9 420 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 CNSTQ6PJW8 725 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 GALNT5Q7Z7M9 940 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 ABI1Q8IZP0 508 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 SEPT8Q92599 483 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 ZNF597Q96LX8 424 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 ZNF70Q9UC06 446 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 PCDHGA7Q9Y5G6 932 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 NAV1Q8NEY1 1877 aa16.02■□□□□ 0.16
PRPF40B-201ENST00000261897 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 TMEM114B3SHH9 223 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 ZBTB24O43167 697 aaPredicted RBP16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 DBTP11182 482 aaKnown RBP16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 S100A1P23297 94 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 TMEM132DQ14C87 1099 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 CUZD1Q86UP6 607 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 CARM1Q86X55 608 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 ERO1BQ86YB8 467 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 CNTD1Q8N815 330 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 NAT9Q9BTE0 207 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 VTI1BQ9UEU0 232 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 PCDHGA3Q9Y5H0 932 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 NFASCO94856 1347 aa16.02■□□□□ 0.15
PRPF40B-201ENST00000261897 LOC100506127A0A0U1RQW1 187 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ZNF195O14628 629 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 PITX1P78337 314 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 NRG1Q02297 640 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 LAPTM4AQ15012 233 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 FAM214AQ32MH5 1076 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 UBE2UQ5VVX9 321 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 HMBOX1Q6NT76 420 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ZNF555Q8NEP9 628 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 CALML6Q8TD86 181 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ITCHQ96J02 903 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 TIMM22Q9Y584 194 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 TFECO14948 347 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 CABYRO75952 493 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 BDNFP23560 247 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 IL4RP24394 825 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 VBP1P61758 197 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 SLC6A3Q01959 620 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 MEP1AQ16819 746 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 SPANXN3Q5MJ09 141 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 RNF139Q8WU17 664 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ESAMQ96AP7 390 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 PPM1MQ96MI6 270 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 IDI2Q9BXS1 227 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 RAD51BO15315 384 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 LYPLA2O95372 231 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ITGBL1O95965 494 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 MT-CYBP00156 380 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 PRKACGP22612 351 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ALDH3B2P48448 385 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 HSD17B4P51659 736 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 TAS2R39P59534 338 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 SURF1Q15526 300 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 B3GNT9Q6UX72 402 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 CTU1Q7Z7A3 348 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 CMTR2Q8IYT2 770 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 STARD8Q92502 1023 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 EDEM1Q92611 657 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ACDQ96AP0 544 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms