RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ATPAF2Q8N5M1 289 aa14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 KDM1BQ8NB78 822 aa14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 EMID1Q96A84 441 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 SMOQ99835 787 aa14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 MRPL46Q9H2W6 279 aaKnown RBP14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 PREBQ9HCU5 417 aa14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 TRHDEQ9UKU6 1024 aa14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 DERAQ9Y315 318 aa14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 IPPQ9Y573 584 aa14.6□□□□□ -0.07
SFSWAP-201ENST00000261674 UBDO15205 165 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 AKAP10O43572 662 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 ADAMTS4O75173 837 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 H2AFYO75367 372 aaKnown RBP14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 TIPRLO75663 272 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 YWHAQP27348 245 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 ACLYP53396 1101 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 CDH15P55291 814 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 FAM83EQ2M2I3 478 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 FBXO48Q5FWF7 155 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 KCTD11Q693B1 232 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 SETD3Q86TU7 594 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 IFNEQ86WN2 208 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 MFSD6LQ8IWD5 586 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 TMEM151AQ8N4L1 468 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 ZNF512Q96ME7 567 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 TBL1YQ9BQ87 522 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 C1QTNF1Q9BXJ1 281 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 RBM22Q9NW64 420 aaKnown RBP eCLIP14.59□□□□□ -0.075e-11■■■■■ 35.9
SFSWAP-201ENST00000261674 SAC3D1A6NKF1 404 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 ZNF839A8K0R7 811 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 CCDC166P0CW27 439 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 BDNFP23560 247 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 PCSK6P29122 969 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 PNPLA4P41247 253 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 INHBCP55103 352 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 MAXP61244 160 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 KIF19Q2TAC6 998 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 PKN3Q6P5Z2 889 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 RNF180Q86T96 592 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 ADCY4Q8NFM4 1077 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 TMIGD2Q96BF3 282 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 GLT1D1Q96MS3 346 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 TRIM8Q9BZR9 551 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 TNFRSF12AQ9NP84 129 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 STARD7Q9NQZ5 370 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 ARHGEF38Q9NXL2 777 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 VTI1BQ9UEU0 232 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 GIMAP2Q9UG22 337 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 GTF2IRD1Q9UHL9 959 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 FBXO5Q9UKT4 447 aa14.59□□□□□ -0.07
SFSWAP-201ENST00000261674 PSMD12O00232 456 aaPredicted RBP14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 SDHDO14521 159 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 NCAM2O15394 837 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 MSI1O43347 362 aaKnown RBP14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 GPR32O75388 356 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 CD52P31358 61 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 SCNN1AP37088 669 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 TMED1Q13445 227 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 CATSPER1Q8NEC5 780 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 PPHLN1Q8NEY8 458 aaKnown RBP14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 GAD1Q99259 594 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 MPP6Q9NZW5 540 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 RAB26Q9ULW5 256 aa14.58□□□□□ -0.07
SFSWAP-201ENST00000261674 FAM149AA5PLN7 773 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 DENRO43583 198 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 BCAS2O75934 225 aaPredicted RBP14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 C1QTNF8P60827 252 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 SNX17Q15036 470 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 UGP2Q16851 508 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 PCID2Q5JVF3 399 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 FAM35AQ86V20 835 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 SLC29A1Q99808 456 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 AGO3Q9H9G7 860 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 GDAP2Q9NXN4 497 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 NDUFA13Q9P0J0 144 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 EGFL7Q9UHF1 273 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 SFMBT1Q9UHJ3 866 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 MTF2Q9Y483 593 aaPredicted RBP14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 C7orf72A4D263 438 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 ERI2A8K979 691 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 TRIM38O00635 465 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 MTSS1O43312 755 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 STAMBPO95630 424 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 ASLP04424 464 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 CD151P48509 253 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 CXCR3P49682 368 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 CCL23P55773 120 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 MGAT5BQ3V5L5 792 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 NEPROQ6NW34 567 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 HERC6Q8IVU3 1022 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 SCAMP5Q8TAC9 235 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 NT5C3BQ969T7 300 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 NDFIP2Q9NV92 336 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 GALNT8Q9NY28 637 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 CRYL1Q9Y2S2 319 aa14.58□□□□□ -0.08
SFSWAP-201ENST00000261674 ANKRD33BA6NCL7 494 aa14.57□□□□□ -0.08
SFSWAP-201ENST00000261674 TRPC5OSA6NMA1 111 aa14.57□□□□□ -0.08
SFSWAP-201ENST00000261674 GRIA3P42263 894 aa14.57□□□□□ -0.08
SFSWAP-201ENST00000261674 TSTD2Q5T7W7 516 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms