RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PDPK2PQ6A1A2 396 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 FAM171BQ6P995 826 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 GLT6D1Q7Z4J2 308 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SNX32Q86XE0 403 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SPATS2Q86XZ4 545 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 MFSD6LQ8IWD5 586 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RTL3Q8N8U3 475 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PIWIL2Q8TC59 973 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 KCTD13Q8WZ19 329 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 NSL1Q96IY1 281 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 C1orf50Q9BV19 199 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 NOL6Q9H6R4 1146 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 ZMYM5Q9UJ78 669 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 STARD13Q9Y3M8 1113 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 DICER1Q9UPY3 1922 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 FFAR3O14843 346 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 INSIG1O15503 277 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 GPR42O15529 346 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 GLRA3O75311 464 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 DLDP09622 509 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 WASP42768 502 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 ETV4P43268 484 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 NEK3P51956 506 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RALGDSQ12967 914 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 FAM83EQ2M2I3 478 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 TNFAIP8L3Q5GJ75 292 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RABGAP1LQ5R372 815 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 NADSYN1Q6IA69 706 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 CNPY4Q8N129 248 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PGBD5Q8N414 524 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 GALNT4Q8N4A0 578 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RBBP8Q99708 897 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 LATS2Q9NRM7 1088 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 ZDHHC2Q9UIJ5 367 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 NCOR1O75376 2440 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RGPD3A6NKT7 1758 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RGPD4Q7Z3J3 1758 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 LOC102724159A0A0B4J2E5 919 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 UBXN8O00124 270 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SMAD6O43541 496 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 ANXA9O76027 345 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SRP72O76094 671 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 URODP06132 367 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PSMC3P17980 439 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 EFNA1P20827 205 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 COG7P83436 770 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 GALNT2Q10471 571 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PAFAH1B3Q15102 231 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PWP2Q15269 919 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RPS6KA2Q15349 733 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 DNAJB7Q7Z6W7 309 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 LSRQ86X29 649 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 C2orf73Q8N5S3 287 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 TRPC4APQ8TEL6 797 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 FBXO44Q9H4M3 255 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 TMEM161AQ9NX61 479 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 NCKIPSDQ9NZQ3 722 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 FKBPLQ9UIM3 349 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PCDHB8Q9UN66 801 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 CCDC162PA2VCL2 907 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 ZNF623O75123 536 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 NDUFS3O75489 264 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 GOT2P00505 430 aaKnown RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 TPSB2P20231 275 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 CD151P48509 253 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SERPINB8P50452 374 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 RENBPP51606 427 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 DLG1Q12959 904 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 XRCC4Q13426 336 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 IKBKEQ14164 716 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 VEPH1Q14D04 833 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 TPSAB1Q15661 275 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 PTPRNQ16849 979 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 XKR4Q5GH76 650 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SPDYCQ5MJ68 293 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 ZNF648Q5T619 568 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 GK5Q6ZS86 529 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 RFLNAQ6ZTI6 216 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SLC7A6OSQ96CW6 309 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 ACOX2Q99424 681 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 MYOCQ99972 504 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 IL22Q9GZX6 179 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 WWP1Q9H0M0 922 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 KCNK13Q9HB14 408 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 MOCS1Q9NZB8 636 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 CFAP97Q9P2B7 532 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 GALPQ9UBC7 116 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SLC12A4Q9UP95 1085 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 AAR2Q9Y312 384 aaKnown RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SPO11Q9Y5K1 396 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 ZDBF2Q9HCK1 2354 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 NRG2O14511 850 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 TNFRSF10BO14763 440 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 CHUKO15111 745 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 MATN3O15232 486 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 PEX1O43933 1283 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 RASSF9O75901 435 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms