RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 PPHLN1Q8NEY8 458 aaKnown RBP17.1■□□□□ 0.33
CDK4-201ENST00000257904 GRIN3AQ8TCU5 1115 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 RMND5BQ96G75 393 aaPredicted RBP17.1■□□□□ 0.33
CDK4-201ENST00000257904 TSGA13Q96PP4 275 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 ANKRD60Q9BZ19 345 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 IGSF5Q9NSI5 407 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 HACD3Q9P035 362 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 CCDC167Q9P0B6 97 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 FAM155AB1AL88 458 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 HTRA2O43464 458 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 SNAI1O95863 264 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 MT-CYBP00156 380 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 SNRPB2P08579 225 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 CD151P48509 253 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 ZNF135P52742 658 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 PPP1R3AQ16821 1122 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 XKR4Q5GH76 650 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 KIAA0319Q5VV43 1072 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 CYP2R1Q6VVX0 501 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 GPR142Q7Z601 462 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 C2CD4AQ8NCU7 369 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 IPMKQ8NFU5 416 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 DIS3LQ8TF46 1054 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 ITFG2Q969R8 447 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 PBXIP1Q96AQ6 731 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 FAM210AQ96ND0 272 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 EFHD1Q9BUP0 239 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 NOL11Q9H8H0 719 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 EML4Q9HC35 981 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 TNFRSF12AQ9NP84 129 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 TMEM181Q9P2C4 612 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 FNDC1Q4ZHG4 1894 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 MRASO14807 208 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 ADARP55265 1226 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 COG7P83436 770 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 TECRLQ5HYJ1 363 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 SAMD4BQ5PRF9 694 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 DENND5AQ6IQ26 1287 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 FAM45BPQ6NSW5 357 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 C8orf82Q6P1X6 216 aaPredicted RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 FAM45AQ8TCE6 357 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 HM13Q8TCT9 377 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 GFM2Q969S9 779 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 SLC25A23Q9BV35 468 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 TKTL2Q9H0I9 626 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 CYP4F12Q9HCS2 524 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 CNGB3Q9NQW8 809 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 DNAAF2Q9NVR5 837 aaKnown RBP17.09■□□□□ 0.33
CDK4-201ENST00000257904 SLC2A6Q9UGQ3 507 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 TCAF1Q9Y4C2 921 aa17.09■□□□□ 0.33
CDK4-201ENST00000257904 RBM47A0AV96 593 aaKnown RBP17.08■□□□□ 0.33
CDK4-201ENST00000257904 USP17L7P0C7H9 530 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 DARSP14868 501 aaKnown RBP17.08■□□□□ 0.33
CDK4-201ENST00000257904 CPB1P15086 417 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 KCNA5P22460 613 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 NDST2P52849 883 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 SLC12A2P55011 1212 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 PFKPQ01813 784 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 POU4F1Q01851 419 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 ZNF33AQ06730 810 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 CSHL1Q14406 222 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 LPIN1Q14693 890 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 NHSL2Q5HYW2 709 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 IRAK1BP1Q5VVH5 260 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 WSCD1Q658N2 575 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 ZNF470Q6ECI4 717 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 CTU1Q7Z7A3 348 aaKnown RBP17.08■□□□□ 0.33
CDK4-201ENST00000257904 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.33
CDK4-201ENST00000257904 FIBCD1Q8N539 461 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 ANKFN1Q8N957 763 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 CCDC126Q96EE4 140 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 FICDQ9BVA6 458 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 KATNBL1Q9H079 304 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 CHST12Q9NRB3 414 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 DUS2Q9NX74 493 aaKnown RBP17.08■□□□□ 0.33
CDK4-201ENST00000257904 CROTQ9UKG9 612 aa17.08■□□□□ 0.33
CDK4-201ENST00000257904 BPTFQ12830 3046 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 A8MT66 165 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 PLOD2O00469 737 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 NRP2O60462 931 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.32
CDK4-201ENST00000257904 IPO13O94829 963 aaKnown RBP17.08■□□□□ 0.32
CDK4-201ENST00000257904 F9P00740 461 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 CXCR3P49682 368 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 PCBP1Q15365 356 aaKnown RBP eCLIP17.08■□□□□ 0.322e-10■■■■■ 71.2
CDK4-201ENST00000257904 ZNF280DQ6N043 979 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 PPP4R4Q6NUP7 873 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 POTEHQ6S545 545 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 HACD2Q6Y1H2 254 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 ARHGAP36Q6ZRI8 547 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 ZBTB49Q6ZSB9 765 aa17.08■□□□□ 0.32
CDK4-201ENST00000257904 CCDC117Q8IWD4 279 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms