RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ACSM2BQ68CK6 577 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 KCTD16Q68DU8 428 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 JADE3Q92613 823 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 INPP5DQ92835 1189 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 NUS1Q96E22 293 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 ARHGAP9Q9BRR9 750 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 SUCOQ9UBS9 1254 aaKnown RBP13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 FBXW11Q9UKB1 542 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 A0A1W2PRU2 124 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 KRT75O95678 551 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 GUCA1CO95843 209 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 GSRP00390 522 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 IFNA16P05015 189 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 CLNS1AP54105 237 aaKnown RBP13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 MAGOHP61326 146 aaKnown RBP13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 CERCAMQ5T4B2 595 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 SGK2Q9HBY8 427 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 CRTAC1Q9NQ79 661 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 SYBUQ9NX95 663 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 C16orf96A6NNT2 1141 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 KIAA0355O15063 1070 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 TSPAN6O43657 245 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 KCNA5P22460 613 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 RAD23BP54727 409 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 SEC13P55735 322 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 BROXQ5VW32 411 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 KYAT3Q6YP21 454 aaKnown RBP13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 NRSN1Q8IZ57 195 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 TUBGCP3Q96CW5 907 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 SMOC2Q9H3U7 446 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 WDR26Q9H7D7 661 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 GDF3Q9NR23 364 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 ASF1AQ9Y294 204 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 C8GP07360 202 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 TPSB2P20231 275 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 TRPC1P48995 793 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 CASP6P55212 293 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 TPSAB1Q15661 275 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 AADATQ8N5Z0 425 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 OR6C4Q8NGE1 309 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 PPP3R2Q96LZ3 170 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 RAPGEFL1Q9UHV5 662 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 NAALADL1Q9UQQ1 740 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 RAI2Q9Y5P3 530 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 CNMDO75829 334 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 SERPINB5P36952 375 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 ANXA8L1Q5VT79 327 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 PAPD7Q5XG87 772 aaKnown RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 XYLT1Q86Y38 959 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 HMGB4Q8WW32 186 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 SIK3Q9Y2K2 1263 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 DYTNA2CJ06 578 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 MTMR11A4FU01 709 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 OCA2Q04671 838 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 DPYSL3Q14195 570 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 RFTN2Q52LD8 501 aaPredicted RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 GDPD4Q6W3E5 623 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 SCAIQ8N9R8 606 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 DCAF4L2Q8NA75 395 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 DPY30Q9C005 99 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 VRTNQ9H8Y1 702 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 GNEQ9Y223 722 aaKnown RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 COQ4Q9Y3A0 265 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 HBQ1P09105 142 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 SP100P23497 879 aaPredicted RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 VIPR1P32241 457 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 GRIA4P48058 902 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 CYP4F8P98187 520 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 DDX39BQ13838 428 aaKnown RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 ARSHQ5FYA8 562 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 PLEKHA7Q6IQ23 1121 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 KIAA1161Q6NSJ0 714 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 LRRC8BQ6P9F7 803 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 EID3Q8N140 333 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 FAM98AQ8NCA5 519 aaKnown RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 VN1R2Q8NFZ6 395 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 KLHDC7BQ96G42 594 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 ECSITQ9BQ95 431 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 IER2Q9BTL4 223 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 TM6SF2Q9BZW4 377 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 SEMA3GQ9NS98 782 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 WBP1LQ9NX94 342 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 OBP2AQ9NY56 170 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 PCDHB3Q9Y5E6 796 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF780BQ9Y6R6 833 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 CFAP73A6NFT4 308 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 CLDN5O00501 218 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 OTCP00480 354 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 KLK3P07288 261 aaPredicted RBP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 MMP8P22894 467 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 DSG1Q02413 1049 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 KIAA0408Q6ZU52 694 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 DLG3Q92796 817 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 STYXL1Q9Y6J8 313 aa13.49□□□□□ -0.25
PRPF38A-201ENST00000257181 MATN2O00339 956 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 PDE9AO76083 593 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms