RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DCLRE1AQ6PJP8 1040 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 GET4Q7L5D6 327 aaPredicted RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DNAJC1Q96KC8 554 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUSP16Q9BY84 665 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 KLHL18O94889 574 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 TTPAP49638 278 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ZNF544Q6NX49 715 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 SPESP1Q6UW49 350 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 OTOP2Q7RTS6 562 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 BSNDQ8WZ55 320 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 PNPOQ9NVS9 261 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 CFAP97Q9P2B7 532 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ADAM28Q9UKQ2 775 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 CCDC85CA6NKD9 419 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 PSMG1O95456 288 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 CST3P01034 146 aaPredicted RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 COX4I1P13073 169 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 SRSF11Q05519 484 aaKnown RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 TAF10Q12962 218 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ARMC8Q8IUR7 673 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 IMP3Q9NV31 184 aaKnown RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 CCL22O00626 93 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 CD3EAPO15446 510 aaKnown RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ADH1AP07327 375 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 MTAPQ13126 283 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 CCNIQ14094 377 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 HYIQ5T013 277 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ARHGAP36Q6ZRI8 547 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 P2RY11Q96G91 374 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ACE2Q9BYF1 805 aaPredicted RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 GMIPQ9P107 970 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 STK39Q9UEW8 545 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ITPKAP23677 461 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ATP5F1P24539 256 aaPredicted RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 NUP62P37198 522 aaPredicted RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 COPZ1P61923 177 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 RHBDF2Q6PJF5 856 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 AMIGO2Q86SJ2 522 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 PHF13Q86YI8 300 aaPredicted RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 RELTQ969Z4 430 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 SKA1Q96BD8 255 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 LRRC39Q96DD0 335 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 SIKE1Q9BRV8 207 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 C9orf16Q9BUW7 83 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 CD84Q9UIB8 345 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ADAM30Q9UKF2 790 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ITGAVP06756 1048 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 SNRPB2P08579 225 aaKnown RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 IRF2BP2Q7Z5L9 587 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ZNF671Q8TAW3 534 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 EPB41L4BQ9H329 900 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 NOL6Q9H6R4 1146 aaKnown RBP18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 ERVK-5Q9HDB9 667 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 MORF4L1Q9UBU8 362 aa18.79■□□□□ 0.6
SMARCC1-201ENST00000254480 NPEPPSL1A6NEC2 478 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 RNF225M0QZC1 329 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 CCNE2O96020 404 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 EPS8Q12929 822 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 NAB1Q13506 487 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 KLHL17Q6TDP4 642 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 CIR1Q86X95 450 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 KREMEN1Q96MU8 473 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 SNX10Q9Y5X0 201 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3DA0A087WVF3 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3IA0A087WXS9 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3EA0A087X179 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3KA0A087X1G2 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3FA6NER0 549 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3LB9A6J9 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 C1QTNF3-AMACRE9PGA6 284 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 ACSL4O60488 711 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 ANXA6P08133 673 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3HP0C7X1 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 NR2F1P10589 423 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 KCNJ2P63252 427 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3GQ6DHY5 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3CQ6IPX1 549 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TBC1D3Q8IZP1 549 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 DCBLD1Q8N8Z6 715 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 OR4L1Q8NH43 312 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 CPXM1Q96SM3 734 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 C12orf65Q9H3J6 166 aaKnown RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 HIPK3Q9H422 1215 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 SLC17A7Q9P2U7 560 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 PCYOX1Q9UHG3 505 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 LRRC10BA6NIK2 292 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 MMP3P08254 477 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 CYP4B1P13584 511 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 ADSLP30566 484 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 CLCN5P51795 746 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 WNT3AP56704 352 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 ITGA7Q13683 1181 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 C16orf62Q7Z3J2 963 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 STK32AQ8WU08 396 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 CENPIQ92674 756 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 EBNA1BP2Q99848 306 aaKnown RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 OGDHLQ9ULD0 1010 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 C2CD2Q9Y426 696 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 OFCC1Q8IZS5 231 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms