RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 AREL1O15033 823 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 PSMD3O43242 534 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 SUN1O94901 812 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 MT-CYBP00156 380 aaPredicted RBP14.22□□□□□ -0.13
VPS25-201ENST00000253794 KRT14P02533 472 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 ADRB3P13945 408 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 ETS1P14921 441 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 POLR2LP62875 67 aaKnown RBP14.22□□□□□ -0.13
VPS25-201ENST00000253794 CSTF1Q05048 431 aaKnown RBP14.22□□□□□ -0.13
VPS25-201ENST00000253794 CDK18Q07002 472 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 CNTN1Q12860 1018 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 FAM182AQ5T1J6 154 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 ARMC12Q5T9G4 340 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 KIAA1324Q6UXG2 1013 aaKnown RBP14.22□□□□□ -0.13
VPS25-201ENST00000253794 ZBTB44Q8NCP5 570 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 PIH1D2Q8WWB5 315 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 MCCC1Q96RQ3 725 aaPredicted RBP14.22□□□□□ -0.13
VPS25-201ENST00000253794 PRRX2Q99811 253 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 SGK2Q9HBY8 427 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 DYRK4Q9NR20 520 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 EIF2B3Q9NR50 452 aaKnown RBP14.22□□□□□ -0.13
VPS25-201ENST00000253794 FBXL12Q9NXK8 326 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 SERGEFQ9UGK8 458 aa14.22□□□□□ -0.13
VPS25-201ENST00000253794 IGHV1OR15-9A0A0B4J2B8 117 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 GOLGA6CA6NDK9 693 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 GOLGA6BA6NDN3 693 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 UPK3BL1B0FP48 263 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 UPK3BL2E5RIL1 263 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 SPINT1O43278 529 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 PLRG1O43660 514 aaKnown RBP14.21□□□□□ -0.13
VPS25-201ENST00000253794 AP2A1O95782 977 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 CPP00450 1065 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 ZSCAN5DPP0CG00 497 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 GOLGA6DP0CG33 693 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 SP9P0CG40 484 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 TIMP2P16035 220 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 CNR2P34972 360 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 GRIA4P48058 902 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 WNT3AP56704 352 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 DR1Q01658 176 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 DMWDQ09019 674 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 UGP2Q16851 508 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 TSSK4Q6SA08 328 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 RANBP10Q6VN20 620 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 PRUNE1Q86TP1 453 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 JAMLQ86YT9 394 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 KLHL7Q8IXQ5 586 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 HDDC3Q8N4P3 179 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 MMGT1Q8N4V1 131 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 CEP112Q8N8E3 955 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 ERLEC1Q96DZ1 483 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 LYSMD1Q96S90 227 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 KRT12Q99456 494 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 OMDQ99983 421 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 TPSD1Q9BZJ3 242 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 PCED1AQ9H1Q7 454 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 LRRC40Q9H9A6 602 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 ETNK1Q9HBU6 452 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 ARNT2Q9HBZ2 717 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 ZSCAN32Q9NX65 697 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 GOLGA6AQ9NYA3 693 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 WSB2Q9NYS7 404 aaPredicted RBP14.21□□□□□ -0.13
VPS25-201ENST00000253794 PHTF1Q9UMS5 762 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 NCKAP1Q9Y2A7 1128 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 PCDHB9Q9Y5E1 797 aa14.21□□□□□ -0.13
VPS25-201ENST00000253794 A0A0J9YYE9 177 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 A0A1W2PP55 124 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 FAM187AA6NFU0 413 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 LILRB5O75023 590 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 RNASEH2AO75792 299 aaKnown RBP14.2□□□□□ -0.14
VPS25-201ENST00000253794 NDST3O95803 873 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 TRBC1P01850 177 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 PDHA1P08559 390 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 ATXN1LP0C7T5 689 aaKnown RBP14.2□□□□□ -0.14
VPS25-201ENST00000253794 HLA-DPA1P20036 260 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 TPSB2P20231 275 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 IVDP26440 423 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 ABL2P42684 1182 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 PXNP49023 591 aaPredicted RBP14.2□□□□□ -0.14
VPS25-201ENST00000253794 FNTBP49356 437 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 ADPRHP54922 357 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 TAS2R38P59533 333 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 CDK16Q00536 496 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 C2orf54Q08AI8 447 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 TPSAB1Q15661 275 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 USP39Q53GS9 565 aaKnown RBP14.2□□□□□ -0.14
VPS25-201ENST00000253794 NEK5Q6P3R8 708 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 MAATS1Q7Z4T9 603 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 C11orf74Q86VG3 221 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 CACUL1Q86Y37 369 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 PGBD3Q8N328 593 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 SCRN2Q96FV2 425 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 ADGRE3Q9BY15 652 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 BTBD1Q9H0C5 482 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 KCNH6Q9H252 994 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 NEUROG2Q9H2A3 272 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 PREBQ9HCU5 417 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 CD93Q9NPY3 652 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 RAB6BQ9NRW1 208 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 TPX2Q9ULW0 747 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms