RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 SPOCK2Q92563 424 aa25.32■■□□□ 1.64
LSM7-201ENST00000252622 RNF25Q96BH1 459 aaPredicted RBP25.32■■□□□ 1.64
LSM7-201ENST00000252622 LACRTQ9GZZ8 138 aa25.32■■□□□ 1.64
LSM7-201ENST00000252622 GDF3Q9NR23 364 aa25.32■■□□□ 1.64
LSM7-201ENST00000252622 TM7SF3Q9NS93 570 aa25.32■■□□□ 1.64
LSM7-201ENST00000252622 H0Y8X5 98 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 TRAFD1O14545 582 aaPredicted RBP25.31■■□□□ 1.64
LSM7-201ENST00000252622 CCT8P50990 548 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 NOVA1P51513 510 aaKnown RBP25.31■■□□□ 1.64
LSM7-201ENST00000252622 FOXK2Q01167 660 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 TMEM52BQ4KMG9 183 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 MFSD7Q6UXD7 560 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 KIAA1328Q86T90 577 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 ZSWIM9Q86XI8 627 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 FAM174AQ8TBP5 190 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 NSMCE3Q96MG7 304 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 SLC32A1Q9H598 525 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 FZD3Q9NPG1 666 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 SCUBE2Q9NQ36 999 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 AMACRQ9UHK6 382 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 CA5BQ9Y2D0 317 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 DUSP10Q9Y6W6 482 aa25.31■■□□□ 1.64
LSM7-201ENST00000252622 IGLON5A6NGN9 336 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 SOCS5O75159 536 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 CEACAM1P13688 526 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 CDKN2BP42772 138 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 SGCGQ13326 291 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 ERAP2Q6P179 960 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 ABI3BPQ7Z7G0 1075 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 RFX6Q8HWS3 928 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 DENND6BQ8NEG7 585 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 CXorf40AQ8TE69 158 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 LENG8Q96PV6 779 aaPredicted RBP25.3■■□□□ 1.64
LSM7-201ENST00000252622 ELF4Q99607 663 aaPredicted RBP25.3■■□□□ 1.64
LSM7-201ENST00000252622 MYOCQ99972 504 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 ERVMER34-1Q9H9K5 563 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 PCDH12Q9NPG4 1184 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 ATP8A1Q9Y2Q0 1164 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.3■■□□□ 1.64
LSM7-201ENST00000252622 HS3ST3A1Q9Y663 406 aa25.3■■□□□ 1.64
LSM7-201ENST00000252622 TRPM6Q9BX84 2022 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 A0A1B0GTQ1 180 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 A0A1W2PQ67 120 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 HTRA2O43464 458 aaPredicted RBP25.29■■□□□ 1.64
LSM7-201ENST00000252622 PAK4O96013 591 aaPredicted RBP25.29■■□□□ 1.64
LSM7-201ENST00000252622 ITIH2P19823 946 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 MAXP61244 160 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 PPIDQ08752 370 aaKnown RBP25.29■■□□□ 1.64
LSM7-201ENST00000252622 TFDP2Q14188 446 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 ALG1LQ6GMV1 187 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 PSAPL1Q6NUJ1 521 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 SPOCD1Q6ZMY3 1216 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 GCNT7Q6ZNI0 430 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 CCDC13Q8IYE1 715 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 OXR1Q8N573 874 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 DEFB124Q8NES8 71 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 KLHDC7BQ96G42 594 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 OLFM3Q96PB7 478 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 POLR1EQ9GZS1 481 aaKnown RBP25.29■■□□□ 1.64
LSM7-201ENST00000252622 NOD2Q9HC29 1040 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 NT5MQ9NPB1 228 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 HAUS2Q9NVX0 235 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 HEY1Q9Y5J3 304 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 SHROOM3Q8TF72 1996 aa25.29■■□□□ 1.64
LSM7-201ENST00000252622 DOCK9Q9BZ29 2069 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 TP53BP1Q12888 1972 aaPredicted RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 KCNK3O14649 394 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 RIOK3O14730 519 aaKnown RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 YKT6O15498 198 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 PCDHGA12O60330 932 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 MMP12P39900 470 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 MARCKSL1P49006 195 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 NAP1L1P55209 391 aaKnown RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 POLR2LP62875 67 aaKnown RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 PDK1Q15118 436 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 KYAT3Q6YP21 454 aaKnown RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 DBX2Q6ZNG2 339 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 SPATS2Q86XZ4 545 aaKnown RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 NAXDQ8IW45 347 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 RCOR2Q8IZ40 523 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 CCNYQ8ND76 341 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 RBM41Q96IZ5 413 aaKnown RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 KLF6Q99612 283 aaPredicted RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 DESI2Q9BSY9 194 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 CNOT1A5YKK6 2376 aaKnown RBP25.28■■□□□ 1.64
LSM7-201ENST00000252622 TMEM131Q92545 1883 aa25.28■■□□□ 1.64
LSM7-201ENST00000252622 TTC24A2A3L6 582 aaPredicted RBP25.27■■□□□ 1.64
LSM7-201ENST00000252622 A6NNZ2 444 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 RAD51BO15315 384 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 MMP20O60882 483 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 TM7SF2O76062 418 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 ZRANB2O95218 330 aaKnown RBP eCLIP25.27■■□□□ 1.64
LSM7-201ENST00000252622 THEGLP0DJG4 465 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 CCNB1P14635 433 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 KCNA4P22459 653 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 CES1P23141 567 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 CTNNA1P35221 906 aaKnown RBP25.27■■□□□ 1.64
LSM7-201ENST00000252622 KIF5AQ12840 1032 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 EXD1Q8NHP7 514 aa25.27■■□□□ 1.64
LSM7-201ENST00000252622 KRT35Q92764 455 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms