RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 GPC2Q8N158 579 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 LPPQ93052 612 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 NAA50Q9GZZ1 169 aaKnown RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 BRD8Q9H0E9 1235 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SMIM28A0A1B0GU29 152 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 TRPC5OSA6NMA1 111 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 TMEM114B3SHH9 223 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SDHDO14521 159 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 BCAS2O75934 225 aaPredicted RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 CYP2C9P11712 490 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 NPR3P17342 541 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SDHAF4Q5VUM1 108 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 STEAP4Q687X5 459 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 TMEM26Q6ZUK4 368 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 CHSY3Q70JA7 882 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 AHI1Q8N157 1196 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SHCBP1Q8NEM2 672 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 BPIFB6Q8NFQ5 453 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 BLOC1S5Q8TDH9 187 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 GAB3Q8WWW8 586 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 PLEKHG4BQ96PX9 1271 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 DGCR6LQ9BY27 220 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 IL22Q9GZX6 179 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 NT5MQ9NPB1 228 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SEMA4BQ9NPR2 832 aaPredicted RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 FAM50BQ9Y247 325 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 DGKBQ9Y6T7 804 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 DPYSL4O14531 572 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 ATP5BP06576 529 aaKnown RBP12.05□□□□□ -0.48
USHBP1-201ENST00000252597 CPB1P15086 417 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 IL10P22301 178 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 BDNFP23560 247 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 GRM2Q14416 872 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 CARTPTQ16568 116 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 PLPPR4Q7Z2D5 763 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
USHBP1-201ENST00000252597 LSMEM2Q8N112 164 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 TRPC4APQ8TEL6 797 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 GJD2Q9UKL4 321 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 OAZ3Q9UMX2 235 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 NRP2O60462 931 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 ACADSBP45954 432 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 GNA12Q03113 381 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 PERM1Q5SV97 790 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 POTEHQ6S545 545 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 RALGPS2Q86X27 583 aaPredicted RBP12.05□□□□□ -0.48
USHBP1-201ENST00000252597 DCPSQ96C86 337 aaKnown RBP12.05□□□□□ -0.48
USHBP1-201ENST00000252597 RNF145Q96MT1 663 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 CACNA2D2Q9NY47 1150 aa12.05□□□□□ -0.48
USHBP1-201ENST00000252597 RBMX2Q9Y388 322 aaKnown RBP12.05□□□□□ -0.48
USHBP1-201ENST00000252597 POLR2AP24928 1970 aaKnown RBP12.05□□□□□ -0.48
USHBP1-201ENST00000252597 PTGES3LE9PB15 166 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 I6L893 689 aaPredicted RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 TOR1BO14657 336 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 AFF1P51825 1210 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 BFSP2Q13515 415 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 DUS1LQ6P1R4 473 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 STRADAQ7RTN6 431 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CLEC4FQ8N1N0 589 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 KDM1BQ8NB78 822 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 RIN3Q8TB24 985 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CCDC138Q96M89 665 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 UBQLN1Q9UMX0 589 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 KCTD3Q9Y597 815 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CEPT1Q9Y6K0 416 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 SCN1AP35498 2009 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 EI24O14681 340 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 HTRA2O43464 458 aaPredicted RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 SETSIPP0DME0 302 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 ARPP19P56211 112 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 PIGFQ07326 219 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 ITGADQ13349 1161 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 PABPC1LQ4VXU2 614 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 RABL3Q5HYI8 236 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 TMEM214Q6NUQ4 689 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 SLC27A1Q6PCB7 646 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 SAPCD2Q86UD0 394 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CNTD1Q8N815 330 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 C12orf43Q96C57 262 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 TMEM74Q96NL1 305 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CYP2S1Q96SQ9 504 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 TBL1YQ9BQ87 522 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 EXD2Q9NVH0 621 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 SELENONQ9NZV5 590 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 ZNF112Q9UJU3 913 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 TRAF6Q9Y4K3 522 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 IGKV6-21A0A0C4DH24 114 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 A0A0J9YYE9 177 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CYP2B6P20813 491 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 ATP6V1B2P21281 511 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 CCR1P32246 355 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 MAGEA6P43360 314 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 APLP1P51693 650 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 PRKCQQ04759 706 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 SULT2A1Q06520 285 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 IMPG1Q17R60 797 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 NOTUMQ6P988 496 aa12.04□□□□□ -0.48
USHBP1-201ENST00000252597 PATL1Q86TB9 770 aaKnown RBP12.04□□□□□ -0.48
USHBP1-201ENST00000252597 TMEM135Q86UB9 458 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms