RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 PUM1Q14671 1186 aaKnown RBP eCLIP14.37□□□□□ -0.11
CNN1-201ENST00000252456 UGP2Q16851 508 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 SETMARQ53H47 684 aaPredicted RBP14.37□□□□□ -0.11
CNN1-201ENST00000252456 TFDP3Q5H9I0 405 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 FAM182AQ5T1J6 154 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 KIAA1161Q6NSJ0 714 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 TTC7BQ86TV6 843 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 NT5DC3Q86UY8 548 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 RFX6Q8HWS3 928 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 CCDC112Q8NEF3 446 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 KIAA1524Q8TCG1 905 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 ALG3Q92685 438 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 RTKNQ9BST9 563 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 ZDHHC5Q9C0B5 715 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 IL21RQ9HBE5 538 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 NOD2Q9HC29 1040 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 NT5MQ9NPB1 228 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 DNAAF2Q9NVR5 837 aaKnown RBP14.37□□□□□ -0.11
CNN1-201ENST00000252456 SAE1Q9UBE0 346 aaPredicted RBP14.37□□□□□ -0.11
CNN1-201ENST00000252456 CA5BQ9Y2D0 317 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 ANKRD6Q9Y2G4 727 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 SNX11Q9Y5W9 270 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 CAPN6Q9Y6Q1 641 aa14.37□□□□□ -0.11
CNN1-201ENST00000252456 UPK3BL1B0FP48 263 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 UPK3BL2E5RIL1 263 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 SLC31A1O15431 190 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 HTRA2O43464 458 aaPredicted RBP14.36□□□□□ -0.11
CNN1-201ENST00000252456 TSPAN6O43657 245 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 CCNB1P14635 433 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 SDHBP21912 280 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 CTNNA2P26232 953 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 SERPINA4P29622 427 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 NAP1L1P55209 391 aaKnown RBP14.36□□□□□ -0.11
CNN1-201ENST00000252456 RPS21P63220 83 aaKnown RBP14.36□□□□□ -0.11
CNN1-201ENST00000252456 TIGD7Q6NT04 549 aaPredicted RBP14.36□□□□□ -0.11
CNN1-201ENST00000252456 BRAT1Q6PJG6 821 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 RCOR2Q8IZ40 523 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 KLF6Q99612 283 aaPredicted RBP14.36□□□□□ -0.11
CNN1-201ENST00000252456 MYOCQ99972 504 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 C1QTNF2Q9BXJ5 285 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
CNN1-201ENST00000252456 FZD3Q9NPG1 666 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 AASDHPPTQ9NRN7 309 aa14.36□□□□□ -0.11
CNN1-201ENST00000252456 DCDC2BA2VCK2 349 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 IGLON5A6NGN9 336 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 PRAMEF26H0Y7S4 382 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 H0Y8X5 98 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 KCNK1O00180 336 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 RAD51BO15315 384 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 CST8O60676 142 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 PRKCGP05129 697 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 HLA-DQB2P05538 268 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 ZFXP17010 805 aaPredicted RBP14.35□□□□□ -0.11
CNN1-201ENST00000252456 MMP12P39900 470 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 BCL2L1Q07817 233 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 TRAF2Q12933 501 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 ZBTB17Q13105 803 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 TEAD4Q15561 434 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 PPP2R5EQ16537 467 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 HLA-BQ31612 363 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 ODF2Q5BJF6 829 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 RALGPS1Q5JS13 557 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 CCDC13Q8IYE1 715 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 BBS5Q8N3I7 341 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 CNTD1Q8N815 330 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 CCNYQ8ND76 341 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 NSMCE1Q8WV22 266 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 RBM41Q96IZ5 413 aaKnown RBP14.35□□□□□ -0.11
CNN1-201ENST00000252456 FEM1CQ96JP0 617 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 IL12RB2Q99665 862 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 SLC17A9Q9BYT1 436 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 PCDH12Q9NPG4 1184 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 FNDC3AQ9Y2H6 1198 aaKnown RBP14.35□□□□□ -0.11
CNN1-201ENST00000252456 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
CNN1-201ENST00000252456 PCDHGC4Q9Y5F7 938 aa14.35□□□□□ -0.11
CNN1-201ENST00000252456 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 CCDC66A2RUB6 948 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 SOCS5O75159 536 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 PAK4O96013 591 aaPredicted RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 HNRNPA2B1P22626 353 aaKnown RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 SUOXP51687 545 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 ATXN3P54252 364 aaPredicted RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 IFI35P80217 286 aaPredicted RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 SEMG2Q02383 582 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 RALGDSQ12967 914 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 TFDP2Q14188 446 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 PDK1Q15118 436 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 UAP1L1Q3KQV9 507 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 TMEM52BQ4KMG9 183 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 KAZNQ674X7 775 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 GCNT7Q6ZNI0 430 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 TXLNBQ8N3L3 684 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 MFSD2AQ8NA29 543 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 ARRDC2Q8TBH0 407 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 ZNF830Q96NB3 372 aaPredicted RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 SEMA3CQ99985 751 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 GAREM1Q9H706 876 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms