RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ZNF460Q14592 562 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SPDYE7PQ495Y7 208 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SLC26A9Q7LBE3 791 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 MILR1Q7Z6M3 343 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 HEATR4Q86WZ0 1026 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 PDSS2Q86YH6 399 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SYTL1Q8IYJ3 562 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 DLG3Q92796 817 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 DNAJC28Q9NX36 388 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ST3GAL5Q9UNP4 418 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 RNASEH1O60930 286 aaKnown RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 FGFR1P11362 822 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF132P52740 706 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 VAC14Q08AM6 782 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 GALNT3Q14435 633 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 IL23RQ5VWK5 629 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CGB2Q6NT52 195 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 GLT6D1Q7Z4J2 308 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 PARK7Q99497 189 aaKnown RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SEMA3CQ99985 751 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CCDC28BQ9BUN5 200 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 XYLT2Q9H1B5 865 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 BLOC1S6Q9UL45 172 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 DOCK3Q8IZD9 2030 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CACNA1IQ9P0X4 2223 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 C5orf58C9J3I9 102 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TRAFD1O14545 582 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TSPAN1O60635 241 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 LTA4HP09960 611 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 DARSP14868 501 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 GRM5P41594 1212 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 GRIK3Q13003 919 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 LPIN1Q14693 890 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PLD6Q8N2A8 252 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 DCBLD1Q8N8Z6 715 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 RORBQ92753 470 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 GALNT8Q9NY28 637 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 LEF1Q9UJU2 399 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF180Q9UJW8 692 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PSAT1Q9Y617 370 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 BTAF1O14981 1849 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 C2orf81A6NN90 581 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PRRG1O14668 218 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 DNAJA2O60884 412 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TOMM70O94826 608 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PLEKHG4Q58EX7 1191 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PCID2Q5JVF3 399 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CXCL17Q6UXB2 119 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 GPRIN3Q6ZVF9 776 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CARNMT1Q8N4J0 409 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 HEXDCQ8WVB3 486 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 COLEC11Q9BWP8 271 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CNTNAP1P78357 1384 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CCDC189A1A4V9 331 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM233B4DJY2 109 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 AZIN1O14977 448 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CD3EAPO15446 510 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ARIH2O95376 493 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PIK3CGP48736 1102 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CXCR3P49682 368 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ARHGAP17Q68EM7 881 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ABRAXAS1Q6UWZ7 409 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 C15orf39Q6ZRI6 1047 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ASRGL1Q7L266 308 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CFAP52Q8N1V2 620 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CNTD1Q8N815 330 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ZC3H15Q8WU90 426 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MYLPFQ96A32 169 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 KATNAL1Q9BW62 490 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 STN1Q9H668 368 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 VWA7Q9Y334 891 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PDHXO00330 501 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MAP3K13O43283 966 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 RFPL1O75677 317 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MRPS15P82914 257 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ENPEPQ07075 957 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TRIM60Q495X7 471 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 RNF219Q5W0B1 726 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CLEC6AQ6EIG7 209 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 FSTL4Q6MZW2 842 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 BNIPLQ7Z465 357 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SPATA16Q9BXB7 569 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PALMDQ9NP74 551 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 NMRK2Q9NPI5 230 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 OR51F1A6NGY5 319 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MSH3P20585 1137 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 HECTD2Q5U5R9 776 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CACHD1Q5VU97 1274 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM26Q6ZUK4 368 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 HS6ST3Q8IZP7 471 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 GMLQ99445 158 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 BDH2Q9BUT1 245 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ARMC7Q9H6L4 198 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MRGBPQ9NV56 204 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TMCO1Q9UM00 188 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 FARP1Q9Y4F1 1045 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 H3BMM5 538 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PDLIM1O00151 329 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 LRIG2O94898 1065 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PLCL1Q15111 1095 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms