RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 C1QTNF7Q9BXJ2 289 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 SLC17A9Q9BYT1 436 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 IL21RQ9HBE5 538 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 GPR27Q9NS67 375 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 ITM2BQ9Y287 266 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
VPREB3-201ENST00000248948 H0Y8X5 98 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 APOL1O14791 398 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 SLC31A1O15431 190 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 ZFXP17010 805 aaPredicted RBP12.89□□□□□ -0.35
VPREB3-201ENST00000248948 COMTP21964 271 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 MMP12P39900 470 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 ARRB1P49407 418 aaPredicted RBP12.89□□□□□ -0.35
VPREB3-201ENST00000248948 VAV2P52735 878 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 GBE1Q04446 702 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 UGP2Q16851 508 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 RAD9BQ6WBX8 426 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 GCNT7Q6ZNI0 430 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 TTC7BQ86TV6 843 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 CAMK1DQ8IU85 385 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 CXorf40AQ8TE69 158 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 LENG8Q96PV6 779 aaPredicted RBP12.89□□□□□ -0.35
VPREB3-201ENST00000248948 C1QTNF2Q9BXJ5 285 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 POLR1EQ9GZS1 481 aaKnown RBP12.89□□□□□ -0.35
VPREB3-201ENST00000248948 GGT7Q9UJ14 662 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
VPREB3-201ENST00000248948 CFAP69A5D8W1 941 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 TRAFD1O14545 582 aaPredicted RBP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 PJA2O43164 708 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 TM7SF2O76062 418 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 TIMP2P16035 220 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 KCNA4P22459 653 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 CCNCP24863 283 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 NFKBIAP25963 317 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 GRK6P43250 576 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 RXRGP48443 463 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 SCNN1BP51168 640 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 GSDMDP57764 484 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 POLR2LP62875 67 aaKnown RBP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 FGL2Q14314 439 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 TAZQ16635 292 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 TMEM52BQ4KMG9 183 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 DCP2Q8IU60 420 aaKnown RBP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 KATNAL2Q8IYT4 538 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 TPCN2Q8NHX9 752 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 BAHD1Q8TBE0 780 aaPredicted RBP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 KLHDC7BQ96G42 594 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 OLFM3Q96PB7 478 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 FZD3Q9NPG1 666 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 PCDH12Q9NPG4 1184 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 DTLQ9NZJ0 730 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 PCOLCE2Q9UKZ9 415 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 REXO2Q9Y3B8 237 aaKnown RBP12.88□□□□□ -0.35
VPREB3-201ENST00000248948 HS3ST3A1Q9Y663 406 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
VPREB3-201ENST00000248948 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 TOR1BO14657 336 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 FPGTO14772 594 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 PPP1R12AO14974 1030 aaPredicted RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 MATN3O15232 486 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 HTRA2O43464 458 aaPredicted RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 THEGLP0DJG4 465 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 CTNNA1P35221 906 aaKnown RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 CDKN2BP42772 138 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 RABIFP47224 123 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 PPIDQ08752 370 aaKnown RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 SGCGQ13326 291 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 AGERQ15109 404 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 LRRC73Q5JTD7 316 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 PTAR1Q7Z6K3 402 aaPredicted RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 GLRX5Q86SX6 157 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 CCDC13Q8IYE1 715 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 KLK6Q92876 244 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 IFT43Q96FT9 208 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 RBM41Q96IZ5 413 aaKnown RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 MYOCQ99972 504 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 MAK16Q9BXY0 300 aaKnown RBP12.87□□□□□ -0.35
VPREB3-201ENST00000248948 BRD8Q9H0E9 1235 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 TFR2Q9UP52 801 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 SCN8AQ9UQD0 1980 aa12.87□□□□□ -0.35
VPREB3-201ENST00000248948 TDRD6O60522 2096 aaKnown RBP12.86□□□□□ -0.35
VPREB3-201ENST00000248948 GIPC1O14908 333 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 RAD51BO15315 384 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 SH3BP5O60239 455 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms