RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ZNF235Q14590 738 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 GRM3Q14832 879 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 CHI3L2Q15782 390 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 INSCQ1MX18 579 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 SIRPB2Q5JXA9 342 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 IL31Q6EBC2 164 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 ALG1LQ6GMV1 187 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 KIAA0930Q6ICG6 404 aaPredicted RBP23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 CHST9Q7L1S5 443 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 FAM217AQ8IXS0 508 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 E2F7Q96AV8 911 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 NSMCE3Q96MG7 304 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 RANBP9Q96S59 729 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 GPR22Q99680 433 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 APOL5Q9BWW9 433 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 CLEC4EQ9ULY5 219 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 USH1CQ9Y6N9 552 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 HGSO14964 777 aaPredicted RBP23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 BIRC5O15392 142 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 SIN3BO75182 1162 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 PROCP04070 461 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 MPP1Q00013 466 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 CTBP1Q13363 440 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 RAB30Q15771 203 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 TPGS1Q6ZTW0 290 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 HTR3DQ70Z44 454 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 RTL10Q7L3V2 364 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 SPON2Q9BUD6 331 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 RHOJQ9H4E5 214 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 IGFLR1Q9H665 355 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 ZNF395Q9H8N7 513 aaPredicted RBP23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 NSMCE4AQ9NXX6 385 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 ARHGAP26Q9UNA1 814 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 CHKBQ9Y259 395 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 TBC1D30Q9Y2I9 924 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 ILVBLA1L0T0 632 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 HEATR9A2RTY3 570 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 KDELR3O43731 214 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 LATS1O95835 1130 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 C1RP00736 705 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 CLEC14AQ86T13 490 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 CARNMT1Q8N4J0 409 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 MGME1Q9BQP7 344 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 ACE2Q9BYF1 805 aaPredicted RBP23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 C20orf27Q9GZN8 174 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 TASP1Q9H6P5 420 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 CAPN7Q9Y6W3 813 aa23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 NUP210Q8TEM1 1887 aaPredicted RBP23.54■■□□□ 1.36
SYNGR3-201ENST00000248121 RHOCP08134 193 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 AVPR1AP37288 418 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 RGRP47804 291 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 PGGT1BP53609 377 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 TMPRSS15P98073 1019 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 IRF9Q00978 393 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 OCRLQ01968 901 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 TSTD2Q5T7W7 516 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 FYB2Q5VWT5 728 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 MFSD6LQ8IWD5 586 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 OR13J1Q8NGT2 312 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 SMG7Q92540 1137 aaKnown RBP23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 KCNK13Q9HB14 408 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 DCTN4Q9UJW0 460 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 LSM7Q9UK45 103 aaKnown RBP23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 A0A096LPK6 155 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 TGDSO95455 350 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 GLP2RO95838 553 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 C2P06681 752 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 GSTA1P08263 222 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 MZF1P28698 734 aaPredicted RBP23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 SLC1A2P43004 574 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 ZNF177Q13360 481 aaPredicted RBP23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 PCLAFQ15004 111 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 FASTKD1Q53R41 847 aaKnown RBP23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 ZCCHC23Q6ZST2 131 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 SETD3Q86TU7 594 aaPredicted RBP23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 TRIM42Q8IWZ5 723 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 MICALL1Q8N3F8 863 aa23.53■■□□□ 1.36
SYNGR3-201ENST00000248121 MROH6A6NGR9 719 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 LINC01565O15544 149 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 SNNO75324 88 aaPredicted RBP23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 TROVE2P10155 538 aaKnown RBP eCLIP23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 ALDH3A1P30838 453 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 OXCT1P55809 520 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 CCDC15Q0P6D6 951 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 BNIP1Q12981 228 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 ARMC3Q5W041 872 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 MBLAC2Q68D91 279 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 TDRD5Q8NAT2 981 aaKnown RBP23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 ST13P5Q8NFI4 369 aaPredicted RBP23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 C7orf26Q96N11 449 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 PSKH2Q96QS6 385 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 UBA2Q9UBT2 640 aaPredicted RBP23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 SLC39A10Q9ULF5 831 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 NUMBLQ9Y6R0 609 aa23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 PRRC2BQ5JSZ5 2229 aaKnown RBP23.52■■□□□ 1.36
SYNGR3-201ENST00000248121 MPOP05164 745 aa23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 DLDP09622 509 aaKnown RBP23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 RNF219Q5W0B1 726 aaPredicted RBP23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 C2CD4AQ8NCU7 369 aaPredicted RBP23.52■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms