RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ATG7O95352 703 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 VNN1O95497 513 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 DLGAP3O95886 979 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 COX4I1P13073 169 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 EPB42P16452 691 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 MZF1P28698 734 aaPredicted RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 THOP1P52888 689 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 PTP4A2Q12974 167 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 NEDD8Q15843 81 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SPDYE7PQ495Y7 208 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SPANXN3Q5MJ09 141 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 KIAA1324Q6UXG2 1013 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 ZNF516Q92618 1163 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 CCDC126Q96EE4 140 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SCLYQ96I15 445 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 BRD9Q9H8M2 597 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 IGSF9Q9P2J2 1179 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 PRPF19Q9UMS4 504 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 MRPL42Q9Y6G3 142 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 ARHGEF9O43307 516 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 TPH1P17752 444 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 NELFEP18615 380 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 CCNA2P20248 432 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 TKTP29401 623 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 PRKD1Q15139 912 aaPredicted RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 SLC25A52Q3SY17 297 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 RALGPS1Q5JS13 557 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 ZCCHC23Q6ZST2 131 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 BANPQ8N9N5 519 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 B3GNT5Q9BYG0 378 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 AJAP1Q9UKB5 411 aaPredicted RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 RUVBL2Q9Y230 463 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 CDYLQ9Y232 598 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 CAB39Q9Y376 341 aaPredicted RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 FUOMA2VDF0 154 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 SYCE1LA8MT33 242 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 H6PDO95479 791 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 HSPA1AP0DMV8 641 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 HSPA1BP0DMV9 641 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 CCL5P13501 91 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 SYN1P17600 705 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 C6orf10Q5SRN2 563 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 SDHAF4Q5VUM1 108 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 ADGRD1Q6QNK2 874 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 TFAP2BQ92481 460 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 OMDQ99983 421 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 C1QTNF7Q9BXJ2 289 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 CCDC90BQ9GZT6 254 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 SEMA6AQ9H2E6 1030 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 PRDM12Q9H4Q4 367 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 WWOXQ9NZC7 414 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 UBA2Q9UBT2 640 aaPredicted RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 SOAT2O75908 522 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 TRIM16O95361 564 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 TFPTP0C1Z6 253 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 GOT1P17174 413 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 POLR2LP62875 67 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 ADAM17P78536 824 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 BCL2L1Q07817 233 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 DUSP4Q13115 394 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 TARBP2Q15633 366 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 RRM2BQ7LG56 351 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 ZC3H3Q8IXZ2 948 aaKnown RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 SUN5Q8TC36 379 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 ZBED3Q96IU2 234 aaPredicted RBP11.06□□□□□ -0.64
COPA-201ENST00000241704 NSMCE3Q96MG7 304 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 OSBPL10Q9BXB5 764 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 ZNF696Q9H7X3 374 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 POLR1BQ9H9Y6 1135 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 PADI4Q9UM07 663 aa11.06□□□□□ -0.64
COPA-201ENST00000241704 H2AFYO75367 372 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 LRCH4O75427 683 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 GLP2RO95838 553 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 AIF1P55008 147 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 DDR2Q16832 855 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 GRTP1Q5TC63 336 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 RSBN1Q5VWQ0 802 aaPredicted RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 CCDC103Q8IW40 242 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 CRYGNQ8WXF5 182 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 TSEN34Q9BSV6 310 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 BHMG1C9JSJ3 638 aaPredicted RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 IFRD1O00458 451 aaPredicted RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A9O60656 530 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 SERPINE1P05121 402 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UNGP13051 313 aaPredicted RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 TSHRP16473 764 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ERCC2P18074 760 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A6P19224 532 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A1P22309 533 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A4P22310 534 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A3P35503 534 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A5P35504 534 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 STT3AP46977 705 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ABCE1P61221 599 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 PRKCQQ04759 706 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms