RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 IARS2Q9NSE4 1012 aaKnown RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 LGALS13Q9UHV8 139 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 TSR3Q9UJK0 312 aaKnown RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 SLC39A10Q9ULF5 831 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 NCOR2Q9Y618 2525 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 BCLAF3A2AJT9 711 aaKnown RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 NDC80O14777 642 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 LYPLA1O75608 230 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 PIRTP0C851 137 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 MYL2P10916 166 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 PTPN7P35236 360 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 SERPINB4P48594 390 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 ALDH18A1P54886 795 aaKnown RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 SRSF5Q13243 272 aaKnown RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 GAS6Q14393 721 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 DHCR24Q15392 516 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 BBS7Q8IWZ6 715 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 GSDMBQ8TAX9 411 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 DQX1Q8TE96 717 aaKnown RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 SLC44A1Q8WWI5 657 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 FCRL2Q96LA5 508 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 ZNF778Q96MU6 729 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 NPY6RQ99463 290 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 FSD1LQ9BXM9 530 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 C2orf42Q9NWW7 574 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 TSC2P49815 1807 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 DMDP11532 3685 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 MYOFQ9NZM1 2061 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 ADH1CP00326 375 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 OAS1P00973 400 aaKnown RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SERPINB3P29508 390 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CXCR3P49682 368 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 MGAT5Q09328 741 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PKN3Q6P5Z2 889 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 STRA8Q7Z7C7 330 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 KIAA2013Q8IYS2 634 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CFAP52Q8N1V2 620 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 RYBPQ8N488 228 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SPEM1Q8N4L4 309 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 ATPAF2Q8N5M1 289 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 RPLP0P6Q8NHW5 317 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CLDN23Q96B33 292 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 HHIPQ96QV1 700 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 FRMD8P1Q9BZ68 369 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 ACTR5Q9H9F9 607 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 NDFIP2Q9NV92 336 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SENP1Q9P0U3 644 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SLC12A8A0AV02 714 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 TNFRSF10BO14763 440 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 TPP1O14773 563 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PAGE1O75459 146 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 DAB1O75553 588 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 ZWINTO95229 277 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 WASP42768 502 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CHRNA4P43681 627 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 RPS9P46781 194 aaKnown RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SLC6A11P48066 632 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SLC7A9P82251 487 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 USP4Q13107 963 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SNCBQ16143 134 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CGB2Q6NT52 195 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 TTC7BQ86TV6 843 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PDCD6IPQ8WUM4 868 aaKnown RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 EXT2Q93063 718 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 SIGLEC10Q96LC7 697 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CEP295NLQ96MC4 621 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 RBM22Q9NW64 420 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 TBC1D14Q9P2M4 693 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 INVSQ9Y283 1065 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 LOC100653049A0A140TA62 436 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PRR23AA6NEV1 266 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 NEDD8-MDP1E9PL57 170 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PHGDHO43175 533 aaKnown RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 BNIP3LO60238 219 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 KRT34O76011 436 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 ENO1P06733 434 aaKnown RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 POLBP06746 335 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 ADH5P11766 374 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 NCF2P19878 526 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 TIE1P35590 1138 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 NBL1P41271 181 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 NR2C2P49116 596 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 ZBTB17Q13105 803 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CTBP1Q13363 440 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PDK4Q16654 411 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 N4BP2L1Q5TBK1 243 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-201ENST00000238497 FSTL4Q6MZW2 842 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 GPATCH11Q8N954 259 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 HIPK4Q8NE63 616 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 OR6P1Q8NGX9 317 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 MSANTD3Q96H12 275 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 NCAPGQ9BPX3 1015 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 BBS2Q9BXC9 721 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 PRM3Q9NNZ6 103 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 CNGB3Q9NQW8 809 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 ZSCAN32Q9NX65 697 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 DNMT3LQ9UJW3 386 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 USH1CQ9Y6N9 552 aa8.75□□□□□ -1.01
VPS4B-201ENST00000238497 GOLGA4Q13439 2230 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms