RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GGA2Q9UJY4 613 aa15.33■□□□□ 0.05
HDHD3-201ENST00000238379 NUP210Q8TEM1 1887 aaPredicted RBP15.33■□□□□ 0.04
HDHD3-201ENST00000238379 GMNCA6NCL1 334 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 ZNF821O75541 412 aaPredicted RBP15.33■□□□□ 0.04
HDHD3-201ENST00000238379 ASMTLO95671 621 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 ALDOAP04075 364 aaKnown RBP15.33■□□□□ 0.04
HDHD3-201ENST00000238379 PRKCGP05129 697 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 PABPC1P11940 636 aaKnown RBP15.33■□□□□ 0.04
HDHD3-201ENST00000238379 CTSOP43234 321 aaPredicted RBP15.33■□□□□ 0.04
HDHD3-201ENST00000238379 TRAF2Q12933 501 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 SYCE2Q6PIF2 218 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 NLRP9Q7RTR0 991 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 SRLQ86TD4 932 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 METTL3Q86U44 580 aaKnown RBP15.33■□□□□ 0.04
HDHD3-201ENST00000238379 EFHBQ8N7U6 833 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 OR13J1Q8NGT2 312 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 BRSK1Q8TDC3 778 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 APOPT1Q96IL0 206 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 TM6SF2Q9BZW4 377 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 NSUN3Q9H649 340 aaKnown RBP15.33■□□□□ 0.04
HDHD3-201ENST00000238379 HS3ST2Q9Y278 367 aa15.33■□□□□ 0.04
HDHD3-201ENST00000238379 SIN3BO75182 1162 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 ZWINTO95229 277 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 PIRTP0C851 137 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 SPRP35270 261 aaPredicted RBP15.32■□□□□ 0.04
HDHD3-201ENST00000238379 CSNK1DP48730 415 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 LIMK2P53671 638 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 AP1S1P61966 158 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 ACVR1Q04771 509 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 DHCR24Q15392 516 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 TCEAL5Q5H9L2 206 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 KIAA0907Q7Z7F0 614 aaPredicted RBP15.32■□□□□ 0.04
HDHD3-201ENST00000238379 BLOC1S5Q8TDH9 187 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 TCP10LQ8TDR4 215 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 OSCP1Q8WVF1 389 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 CKAP2Q8WWK9 683 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 SMARCD2Q92925 531 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 RMDN1Q96DB5 314 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 RPL10LQ96L21 214 aaKnown RBP15.32■□□□□ 0.04
HDHD3-201ENST00000238379 ZNF317Q96PQ6 595 aaPredicted RBP15.32■□□□□ 0.04
HDHD3-201ENST00000238379 SLC2A11Q9BYW1 496 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 DUS2Q9NX74 493 aaKnown RBP15.32■□□□□ 0.04
HDHD3-201ENST00000238379 NSMCE4AQ9NXX6 385 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 GGT7Q9UJ14 662 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 KCTD3Q9Y597 815 aa15.32■□□□□ 0.04
HDHD3-201ENST00000238379 TM9SF1O15321 606 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 FZD6O60353 706 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 CYP17A1P05093 508 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 F7P08709 466 aaPredicted RBP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 SRCP12931 536 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 STK19P49842 368 aaPredicted RBP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 NEK3P51956 506 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 CSE1LP55060 971 aaKnown RBP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 LAMB3Q13751 1172 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 DMC1Q14565 340 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 EML3Q32P44 896 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 DGKKQ5KSL6 1271 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 FSTL4Q6MZW2 842 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ANKRD54Q6NXT1 300 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ADIPOR2Q86V24 386 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 GDAP1Q8TB36 358 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 DYDC1Q8WWB3 177 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 PEX13Q92968 403 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 RABEP2Q9H5N1 569 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 MKS1Q9NXB0 559 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 GDE1Q9NZC3 331 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 SLC17A7Q9P2U7 560 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 SPO11Q9Y5K1 396 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ANKRD66B4E2M5 251 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 SLC7A4O43246 635 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 GABRB3P28472 473 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ARSDP51689 593 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 NEPROQ6NW34 567 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 CDHR3Q6ZTQ4 885 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 GET4Q7L5D6 327 aaPredicted RBP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 DENND6AQ8IWF6 608 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 LPCAT1Q8NF37 534 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 BPIFB1Q8TDL5 484 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 BCAS4Q8TDM0 211 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ACMSDQ8TDX5 336 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ISG20Q96AZ6 181 aaKnown RBP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ASIC4Q96FT7 647 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ADGRE3Q9BY15 652 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 C12orf65Q9H3J6 166 aaKnown RBP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 FBXO10Q9UK96 956 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 RIMKLBQ9ULI2 386 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 GRID1Q9ULK0 1009 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 MTO1Q9Y2Z2 717 aaKnown RBP15.31■□□□□ 0.04
HDHD3-201ENST00000238379 ARL5AQ9Y689 179 aa15.31■□□□□ 0.04
HDHD3-201ENST00000238379 COPEO14579 308 aa15.3■□□□□ 0.04
HDHD3-201ENST00000238379 TPP1O14773 563 aa15.3■□□□□ 0.04
HDHD3-201ENST00000238379 TRIM24O15164 1050 aa15.3■□□□□ 0.04
HDHD3-201ENST00000238379 AHSGP02765 367 aa15.3■□□□□ 0.04
HDHD3-201ENST00000238379 SLC8A1P32418 973 aa15.3■□□□□ 0.04
HDHD3-201ENST00000238379 PDE1BQ01064 536 aa15.3■□□□□ 0.04
HDHD3-201ENST00000238379 CTBP1Q13363 440 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms