RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 GTF2H3Q13889 308 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 ADIPOR2Q86V24 386 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 CCNJLQ8IV13 435 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 MYRIPQ8NFW9 859 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 PARD6BQ9BYG5 372 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 INTS6Q9UL03 887 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 RPS6KL1Q9Y6S9 549 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 MEI4A8MW99 385 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 GREM1O60565 184 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 AP2A1O95782 977 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 NEFHP12036 1026 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 AKT1P31749 480 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 RPL21P46778 160 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 BRD3Q15059 726 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 KBTBD6Q86V97 674 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 RAD18Q9NS91 495 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 CFAP99D6REC4 459 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 SEC31AO94979 1220 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 RALBP11234 206 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 WASHC5Q12768 1159 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 SMAD1Q15797 465 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF805Q5CZA5 627 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 TXNDC11Q6PKC3 985 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 KDM1BQ8NB78 822 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 IL22Q9GZX6 179 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 MIR1-1HGQ9H1L0 117 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 SUDS3Q9H7L9 328 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 DMGDHQ9UI17 866 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 OTOL1A6NHN0 477 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 SOCS5O75159 536 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 ACSL3O95573 720 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 INHBAP08476 426 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 ITGALP20701 1170 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 MGAT1P26572 445 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 SIGLEC14Q08ET2 396 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 CST6Q15828 149 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 SETMARQ53H47 684 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 FASTKD1Q53R41 847 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 PRPF39Q86UA1 669 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 ETFBKMTQ8IXQ9 262 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF683Q8IZ20 524 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 OR52K2Q8NGK3 314 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 NOL6Q9H6R4 1146 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZFYVE1Q9HBF4 777 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 USP29Q9HBJ7 922 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 TSC2P49815 1807 aa11.21□□□□□ -0.61
TNFAIP3-201ENST00000237289 METTL18O95568 372 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 DCNP07585 359 aaKnown RBP11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 CISD3P0C7P0 127 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 SAT1P21673 171 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 HADHAP40939 763 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 CCR3P51677 355 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 TMEM196Q5HYL7 178 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 FAM182AQ5T1J6 154 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 ALS2CLQ60I27 953 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 CHST14Q8NCH0 376 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 FBXO25Q8TCJ0 367 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 CALML6Q8TD86 181 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 RUBCNQ92622 972 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 ACOX2Q99424 681 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 POC1B-GALNT4F8VUJ3 575 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 C5AR1P21730 350 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 TRABDQ9H4I3 376 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 SCML1Q9UN30 329 aa11.21□□□□□ -0.62
TNFAIP3-201ENST00000237289 BRCA2P51587 3418 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 MYO16Q9Y6X6 1858 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 A0A1W2PP55 124 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 C16orf96A6NNT2 1141 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 NDUFS3O75489 264 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 CARSP49589 748 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 LRRC73Q5JTD7 316 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 PCID2Q5JVF3 399 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 ERN2Q76MJ5 926 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 MAML1Q92585 1016 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 C9orf72Q96LT7 481 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 HHIPQ96QV1 700 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 MGME1Q9BQP7 344 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 WRAP53Q9BUR4 548 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZFATQ9P243 1243 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 UBA6A0AVT1 1052 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 UPK3BL1B0FP48 263 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 UPK3BL2E5RIL1 263 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 FSBPO95073 299 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 APBB3O95704 486 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 TTC4O95801 387 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 TPSB2P20231 275 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 LPOP22079 712 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 MAGEA4P43358 317 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 TPSAB1Q15661 275 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 POTEHQ6S545 545 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 SKA2Q8WVK7 121 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms