RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ARVCFO00192 962 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 AURKAO14965 403 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 WISP3O95389 354 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 THRAP10827 490 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 VEGFBP49765 207 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 DSC2Q02487 901 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ITKQ08881 620 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ELAVL2Q12926 359 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 LAMB3Q13751 1172 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 BLMHQ13867 455 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 GPNMBQ14956 572 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 MUM1Q2TAK8 710 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 LSM12Q3MHD2 195 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RALGPS1Q5JS13 557 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 AGAP9Q5VTM2 703 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ALG1LQ6GMV1 187 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 FRMD7Q6ZUT3 714 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 MIB1Q86YT6 1006 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 CILP2Q8IUL8 1156 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 PGBD5Q8N414 524 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 KDM1BQ8NB78 822 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 GPR152Q8TDT2 470 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 SCG3Q8WXD2 468 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 CEP295NLQ96MC4 621 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ZNF599Q96NL3 588 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 TTLL2Q9BWV7 592 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 CRISPLD1Q9H336 500 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 SSX2IPQ9Y2D8 614 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 PCDHB7Q9Y5E2 793 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 LOC100653049A0A140TA62 436 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RGSL1A5PLK6 1076 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 H7C4K7 107 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 PRAMEF11O60813 436 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 KRT34O76011 436 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 GNRH1P01148 92 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RBP1P09455 135 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ANPEPP15144 967 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 SESN3P58005 492 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 PFKPQ01813 784 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ZRSR2Q15696 482 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 TECRLQ5HYJ1 363 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 SIRPB2Q5JXA9 342 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RBM20Q5T481 1227 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 FUT10Q6P4F1 479 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 ACAD11Q709F0 780 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 PPFIBP2Q8ND30 876 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RP9Q8TA86 221 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 MOCOSQ96EN8 888 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 MAELQ96JY0 434 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RPRD1AQ96P16 312 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 OLFM1Q99784 485 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 UXTQ9UBK9 157 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 CDH22Q9UJ99 828 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 RIMKLBQ9ULI2 386 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 SLC27A5Q9Y2P5 690 aa16.29■□□□□ 0.2
UBE3D-201ENST00000237186 NYNRINQ9P2P1 1898 aaKnown RBP16.29■□□□□ 0.2
UBE3D-201ENST00000237186 HTTP42858 3142 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 LDB2O43679 373 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 HLA-DPA1P20036 260 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 EPHA3P29320 983 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 ABL2P42684 1182 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 SLC11A1P49279 550 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 GALNT1Q10472 559 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-201ENST00000237186 HERC3Q15034 1050 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 ACAP2Q15057 778 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 ZNF789Q5FWF6 425 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 NADSYN1Q6IA69 706 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 RNF19BQ6ZMZ0 732 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 SETD3Q86TU7 594 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-201ENST00000237186 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 SPATA6LQ8N4H0 392 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 TXNDC5Q8NBS9 432 aaKnown RBP16.28■□□□□ 0.2
UBE3D-201ENST00000237186 FEM1CQ96JP0 617 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 CDK5RAP1Q96SZ6 601 aaKnown RBP16.28■□□□□ 0.2
UBE3D-201ENST00000237186 TMEM175Q9BSA9 504 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 POLR1EQ9GZS1 481 aaKnown RBP16.28■□□□□ 0.2
UBE3D-201ENST00000237186 WDR55Q9H6Y2 383 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-201ENST00000237186 GEMIN8Q9NWZ8 242 aaKnown RBP16.28■□□□□ 0.2
UBE3D-201ENST00000237186 CDYLQ9Y232 598 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 WASF2Q9Y6W5 498 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 TTC3P53804 2025 aa16.28■□□□□ 0.2
UBE3D-201ENST00000237186 TLR5O60602 858 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 NBNO60934 754 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 SOAT2O75908 522 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 S1PR4O95977 384 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 PENKP01210 267 aaPredicted RBP16.27■□□□□ 0.2
UBE3D-201ENST00000237186 INHAP05111 366 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 LTA4HP09960 611 aaKnown RBP16.27■□□□□ 0.2
UBE3D-201ENST00000237186 PIK3R1P27986 724 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 CCR10P46092 362 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 MTTPP55157 894 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 HECTD2Q5U5R9 776 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 TRIM67Q6ZTA4 783 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 DEFB107AQ8IZN7 70 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 DBF4BQ8NFT6 615 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 GPR150Q8NGU9 434 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms