RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TBC1D3HP0C7X1 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 KRT10P13645 584 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 CA4P22748 312 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 ACSL1P33121 698 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 SCNN1BP51168 640 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 NOVA1P51513 510 aaKnown RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 CCR5P51681 352 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 ADPRHP54922 357 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 DYNLT1P63172 113 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 GBE1Q04446 702 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 BCL2L1Q07817 233 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 PPIDQ08752 370 aaKnown RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 SLC10A7Q0GE19 358 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 AP1B1Q10567 949 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 CNTN1Q12860 1018 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 ATXN7L2Q5T6C5 722 aaPredicted RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 DCAF12L1Q5VU92 463 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 KIAA0895LQ68EN5 471 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3GQ6DHY5 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3CQ6IPX1 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 BRAT1Q6PJG6 821 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 ARHGAP36Q6ZRI8 547 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 PRPF39Q86UA1 669 aaKnown RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3Q8IZP1 549 aaPredicted RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TSEN2Q8NCE0 465 aaKnown RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 OR6K2Q8NGY2 324 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 PIGKQ92643 395 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 KRT35Q92764 455 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 FAM131CQ96AQ9 280 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 SKA1Q96BD8 255 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 HAUS1Q96CS2 278 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 OSBPL8Q9BZF1 889 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 POLR1EQ9GZS1 481 aaKnown RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 LHX3Q9UBR4 397 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TRIM10Q9UDY6 481 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 EVLQ9UI08 416 aaPredicted RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 C16orf96A6NNT2 1141 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 HACD1B0YJ81 288 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 NEMP1O14524 444 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 KHNYNO15037 678 aaKnown RBP11.4□□□□□ -0.58
SF3B6-201ENST00000233468 TSPAN6O43657 245 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 AP1G1O43747 822 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 FSBPO95073 299 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 FTCDO95954 541 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 ADRB3P13945 408 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 CCNB1P14635 433 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 DRD3P35462 400 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 PTGER3P43115 390 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 PEX5P50542 639 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 ITKQ08881 620 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 ELP6Q0PNE2 266 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 RPS6KA1Q15418 735 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 DUOXA1Q1HG43 343 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 POM121L1PQ3SYA9 428 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 SEL1L2Q5TEA6 688 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 AGBL4Q5VU57 503 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 ERAP2Q6P179 960 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 NCEH1Q6PIU2 408 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 BBS12Q6ZW61 710 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 ARMCX6Q7L4S7 300 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 TTC7BQ86TV6 843 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 TP53INP2Q8IXH6 220 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 NDUFAF2Q8N183 169 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 DEFB119Q8N690 84 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 TEX26Q8N6G2 289 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 NETO2Q8NC67 525 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 TFB1MQ8WVM0 346 aaKnown RBP11.4□□□□□ -0.58
SF3B6-201ENST00000233468 DNASE2BQ8WZ79 361 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 SNX19Q92543 992 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 MAML1Q92585 1016 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 HES6Q96HZ4 224 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 FEM1CQ96JP0 617 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 EXOC2Q96KP1 924 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 KLHL32Q96NJ5 620 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 NUDCD1Q96RS6 583 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 MGME1Q9BQP7 344 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 NUSAP1Q9BXS6 441 aaKnown RBP11.4□□□□□ -0.58
SF3B6-201ENST00000233468 SUV39H2Q9H5I1 410 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 CD93Q9NPY3 652 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 FSCN3Q9NQT6 498 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 TMEM74BQ9NUR3 256 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 RBM22Q9NW64 420 aaKnown RBP eCLIP11.4□□□□□ -0.58
SF3B6-201ENST00000233468 PILRBQ9UKJ0 227 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 WASF3Q9UPY6 502 aa11.4□□□□□ -0.58
SF3B6-201ENST00000233468 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.4□□□□□ -0.58
SF3B6-201ENST00000233468 A0A1B0GTW7 788 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 APOC4-APOC2K7ER74 178 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 INSIG1O15503 277 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 RNGTTO60942 597 aaKnown RBP11.39□□□□□ -0.59
SF3B6-201ENST00000233468 SOCS5O75159 536 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 STK10O94804 968 aaKnown RBP11.39□□□□□ -0.59
SF3B6-201ENST00000233468 PCDH8O95206 1070 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 PEX11BO96011 259 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 APOC2P02655 101 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 SYPP08247 313 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 ITPKAP23677 461 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 CD27P26842 260 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
SF3B6-201ENST00000233468 RPS21P63220 83 aaKnown RBP11.39□□□□□ -0.59
SF3B6-201ENST00000233468 IFI35P80217 286 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms