RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PPP2R3BQ9Y5P8 575 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 UBIAD1Q9Y5Z9 338 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 COMMD3-BMI1R4GMX3 469 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 CTPS1P17812 591 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 RHBDL3P58872 404 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 SLC1A5Q15758 541 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 AKIRIN2Q53H80 203 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 CERCAMQ5T4B2 595 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 GPRIN3Q6ZVF9 776 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 RNF44Q7L0R7 432 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.46□□□□□ -0.25
NEK4-201ENST00000233027 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 NELL1Q92832 810 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 ZCCHC2Q9C0B9 1178 aaKnown RBP13.46□□□□□ -0.25
NEK4-201ENST00000233027 SLITRK2Q9H156 845 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 ZNHIT2Q9UHR6 403 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 POLR3HQ9Y535 204 aaPredicted RBP13.46□□□□□ -0.25
NEK4-201ENST00000233027 LGR5O75473 907 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 SPIBQ01892 262 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 TMEM63BQ5T3F8 832 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 ACMSDQ8TDX5 336 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 LENG9Q96B70 501 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 SEMA3CQ99985 751 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 CORO1CQ9ULV4 474 aaPredicted RBP13.46□□□□□ -0.25
NEK4-201ENST00000233027 JAK1P23458 1154 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 SERPINA4P29622 427 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.26
NEK4-201ENST00000233027 CYP2A13Q16696 494 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 PTPRNQ16849 979 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 TTC23Q5W5X9 447 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.26
NEK4-201ENST00000233027 ARMC8Q8IUR7 673 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 RASGEF1CQ8N431 466 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 POMGNT2Q8NAT1 580 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 CDCA5Q96FF9 252 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 OSBPL11Q9BXB4 747 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 NOL11Q9H8H0 719 aaKnown RBP13.46□□□□□ -0.26
NEK4-201ENST00000233027 MAFO75444 373 aaPredicted RBP13.46□□□□□ -0.26
NEK4-201ENST00000233027 ENO2P09104 434 aaPredicted RBP13.46□□□□□ -0.26
NEK4-201ENST00000233027 CDH13P55290 713 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 APTXQ7Z2E3 356 aaKnown RBP13.46□□□□□ -0.26
NEK4-201ENST00000233027 HPS6Q86YV9 775 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 KREMEN1Q96MU8 473 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 RSPH9Q9H1X1 276 aaPredicted RBP13.46□□□□□ -0.26
NEK4-201ENST00000233027 NDOR1Q9UHB4 597 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 RPS6KA6Q9UK32 745 aa13.46□□□□□ -0.26
NEK4-201ENST00000233027 GSC2O15499 205 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 HLA-DQA2P01906 255 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 BPGMP07738 259 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 ITGAXP20702 1163 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 SLC7A2P52569 658 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 SPIDRQ14159 915 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 GPR152Q8TDT2 470 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 GORASP1Q9BQQ3 440 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 ADI1Q9BV57 179 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 PLGRKTQ9HBL7 147 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 GSTK1Q9Y2Q3 226 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 SNAP91O60641 907 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 PEX6Q13608 980 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 FASTKD3Q14CZ7 662 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 RNF220Q5VTB9 566 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 FAM20CQ8IXL6 584 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 MSL3Q8N5Y2 521 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 RTL3Q8N8U3 475 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 FAM13CQ8NE31 585 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 ZYG11BQ9C0D3 744 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 CLK4Q9HAZ1 481 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 TRMT13Q9NUP7 481 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 UQCRBP14927 111 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 GPAT3Q53EU6 434 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 C6orf52Q5T4I8 152 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 VSIG10LQ86VR7 867 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 ANKRD52Q8NB46 1076 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 ABHD16BQ9H3Z7 469 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 MAP10Q9P2G4 905 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 MRPS7Q9Y2R9 242 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 TBL1XO60907 577 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 NTSP30990 170 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 CCT3P49368 545 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 NRG1Q02297 640 aaPredicted RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 ILF2Q12905 390 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 RALGDSQ12967 914 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 PAGE2BQ5JRK9 111 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 IRF2BP1Q8IU81 584 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 C4orf32Q8N8J7 132 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 MKL1Q969V6 931 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 ZHX1-C8orf76Q96EF9 292 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 RTKNQ9BST9 563 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 CHID1Q9BWS9 393 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 NMUR2Q9GZQ4 415 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 S100A14Q9HCY8 104 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 C3orf18Q9UK00 162 aa13.45□□□□□ -0.26
NEK4-201ENST00000233027 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
NEK4-201ENST00000233027 SLC28A1O00337 649 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 WFS1O76024 890 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms