RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 PTTG2Q9NZH5 202 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 FOCADQ5VW36 1801 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 H7C1Q1 480 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 PIK3CDO00329 1044 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ATXN7O15265 892 aaPredicted RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 GAS2O43903 313 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 SERPINI2O75830 405 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TRIM16O95361 564 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 SNRNP70P08621 437 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 GJA1P17302 382 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 COMTP21964 271 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TUBG1P23258 451 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 DDX6P26196 483 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPARC-201ENST00000231061 CHRNA5P30532 468 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 BMI1P35226 326 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CCR4P51679 360 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 SLC7A2P52569 658 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 GPC5P78333 572 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 PPP3CAQ08209 521 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ALKBH1Q13686 389 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 USP10Q14694 798 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 TMEM63BQ5T3F8 832 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ATAD3BQ5T9A4 648 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 C16orf59Q7L2K0 433 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ZC3H18Q86VM9 953 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 TCEAL8Q8IYN2 117 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CHURC1Q8WUH1 139 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 DNAJC9Q8WXX5 260 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TMA16Q96EY4 203 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 CCDC120Q96HB5 630 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 B3GALT6Q96L58 329 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ACCSQ96QU6 501 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 FIZ1Q96SL8 496 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TMEM120AQ9BXJ8 343 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 SLC6A17Q9H1V8 727 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 SMOC1Q9H4F8 434 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ACP6Q9NPH0 428 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TIGARQ9NQ88 270 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 PDLIM7Q9NR12 457 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 AAASQ9NRG9 546 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TUBG2Q9NRH3 451 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 IFT52Q9Y366 437 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ZFP37Q9Y6Q3 630 aaPredicted RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 SRRM3A6NNA2 597 aaPredicted RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 SMAD6O43541 496 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 SGPL1O95470 568 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ASS1P00966 412 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 IL6P05231 212 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TNNI1P19237 187 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CYP3A5P20815 502 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ELOAQ14241 798 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 PCGF3Q3KNV8 242 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CCDC137Q6PK04 289 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 UTS2BQ765I0 119 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ATCAYQ86WG3 371 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 FBXL6Q8N531 539 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 VPS33AQ96AX1 596 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ELMO3Q96BJ8 720 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TRIM39Q9HCM9 518 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 DMAC2Q9NW81 257 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 PSMC3IPQ9P2W1 217 aaPredicted RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 UBA2Q9UBT2 640 aaPredicted RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 RAD54BQ9Y620 910 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 A0A1W2PPH5 198 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 HMX3A6NHT5 357 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 MIF4GDA9UHW6 222 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 E9PBE3 544 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CYP26A1O43174 497 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 SCO1O75880 301 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CXCR2P25025 360 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 RPL35P42766 123 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 KCNJ1P48048 391 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ATP11AP98196 1134 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 SLC29A2Q14542 456 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ALG11Q2TAA5 492 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CPNE8Q86YQ8 564 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CAMK1DQ8IU85 385 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 BBS5Q8N3I7 341 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CAMKK1Q8N5S9 505 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ZSWIM2Q8NEG5 633 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 OLIG1Q8TAK6 271 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 GATAD2BQ8WXI9 593 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 XPO6Q96QU8 1125 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 ZSWIM1Q9BR11 485 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 CNOT10Q9H9A5 744 aaKnown RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
SPARC-201ENST00000231061 DIABLOQ9NR28 239 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 ASB4Q9Y574 426 aa8.43□□□□□ -1.06
SPARC-201ENST00000231061 TMEM150BA6NC51 233 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 SLC16A4O15374 487 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 GATCO43716 136 aaKnown RBP8.42□□□□□ -1.06
SPARC-201ENST00000231061 ALX3O95076 343 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 POMCP01189 267 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 KRT8P05787 483 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 IFI30P13284 250 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 TYRP1P17643 537 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 CHRNA3P32297 505 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 MAGEA11P43364 429 aa8.42□□□□□ -1.06
SPARC-201ENST00000231061 RPL21P46778 160 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms