RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 NDUFA13Q9P0J0 144 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 KIAA1522Q9P206 1035 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 C15orf38-AP3S2A0A0A6YYH1 394 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 FKBP1AP62942 108 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 DGKZQ13574 1117 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 APOBEC3HQ6NTF7 200 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 KYAT3Q6YP21 454 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 DEF8Q6ZN54 512 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 ARPINQ7Z6K5 226 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 DHRSXQ8N5I4 330 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 PTGFRNQ9P2B2 879 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CFAP97Q9P2B7 532 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 GRM6O15303 877 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CCNA2P20248 432 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 ALAS2P22557 587 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 MC4RP32245 332 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 UGT2B15P54855 530 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 MOB2Q70IA6 237 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 KATNAL2Q8IYT4 538 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 PRDM16Q9HAZ2 1276 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 H7C0S8 307 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CLCN5P51795 746 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 TMC5Q6UXY8 1006 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 IKBIPQ70UQ0 350 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 ADCY4Q8NFM4 1077 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 HIC2Q96JB3 615 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 LMAN2LQ9H0V9 348 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 PIGUQ9H490 435 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 HOXB8P17481 243 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 RPL3P39023 403 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 OMPP47874 163 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 JSRP1Q96MG2 331 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 IKZF3Q9UKT9 509 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 OGDHLQ9ULD0 1010 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 ATP6V1G2O95670 118 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 H2AFXP16104 143 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ATP4AP20648 1035 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 IL12RB1P42701 662 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ZCCHC9Q8N567 271 aaKnown RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 DCUN1D5Q9BTE7 237 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 SNRNP25Q9BV90 132 aaKnown RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 SLC28A3Q9HAS3 691 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 HPSEQ9Y251 543 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 PTPRMP28827 1452 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 TP73O15350 636 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 TOP3BO95985 862 aaKnown RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 BMP7P18075 431 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 CYP4F2P78329 520 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 CYP4F3Q08477 520 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 SQLEQ14534 574 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 TAF5Q15542 800 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 TTC23Q5W5X9 447 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 SAPCD2Q86UD0 394 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 C8orf59Q8N0T1 100 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 BSNDQ8WZ55 320 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ANKRD7Q92527 254 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 LINGO1Q96FE5 620 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 MORF4L1Q9UBU8 362 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 MYRFQ9Y2G1 1151 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 TRBV23OR9-2A0A075B6M9 112 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 RECQL5O94762 991 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 CORO7P57737 925 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 GPR135Q8IZ08 494 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 SPATA6LQ8N4H0 392 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 CAVIN3Q969G5 261 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 KCNS3Q9BQ31 491 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 MRTO4Q9UKD2 239 aaKnown RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 GIT1Q9Y2X7 761 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 TIPRLO75663 272 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 GJB1P08034 283 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ALADP13716 330 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 CDK16Q00536 496 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 EPS8Q12929 822 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 WDR93Q6P2C0 686 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 UNC5AQ6ZN44 842 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ULK2Q8IYT8 1036 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ZCCHC7Q8N3Z6 543 aaKnown RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 TEX47Q8TBZ9 253 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 MTMR9Q96QG7 549 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 LACRTQ9GZZ8 138 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 CHST7Q9NS84 486 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 EHD3Q9NZN3 535 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 H3BNH8 94 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 LINC00032P0C843 101 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 DGCR6Q14129 220 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 SUZ12Q15022 739 aaKnown RBP13.31□□□□□ -0.28
COL1A1-201ENST00000225964 NRF1Q16656 503 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 SPANXN2Q5MJ10 180 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms