RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PCDHGC4Q9Y5F7 938 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 SPAG17Q6Q759 2223 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 A0A1W2PQ67 120 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 OPHN1O60890 802 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 NFKB1P19838 968 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 SKOR1P84550 965 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 TRAF2Q12933 501 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 SRSF5Q13243 272 aaKnown RBP23.83■■□□□ 1.41
HOMER3-201ENST00000221222 ITPRIPL1Q6GPH6 555 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 PRPF39Q86UA1 669 aaKnown RBP23.83■■□□□ 1.41
HOMER3-201ENST00000221222 FAM124AQ86V42 546 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.83■■□□□ 1.41
HOMER3-201ENST00000221222 CAPZA3Q96KX2 299 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 FCRL5Q96RD9 977 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 GBA3Q9H227 469 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 RAI2Q9Y5P3 530 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 CEP192Q8TEP8 1941 aa23.83■■□□□ 1.41
HOMER3-201ENST00000221222 DCHS1Q96JQ0 3298 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 GOLGA6L10A0A0M3HER8 536 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 PLRG1O43660 514 aaKnown RBP23.82■■□□□ 1.4
HOMER3-201ENST00000221222 ADRB3P13945 408 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 ACSL1P33121 698 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 CD86P42081 329 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 ADPRHP54922 357 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 LPAL2Q16609 132 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 FBXL19Q6PCT2 694 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 CCDC110Q8TBZ0 833 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 RAB7BQ96AH8 199 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 TDRD1Q9BXT4 1180 aaKnown RBP23.82■■□□□ 1.4
HOMER3-201ENST00000221222 KDM4CQ9H3R0 1056 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 RSPH14Q9UHP6 348 aa23.82■■□□□ 1.4
HOMER3-201ENST00000221222 FZD6O60353 706 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 TIMP2P16035 220 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 BCKDHBP21953 392 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 CA4P22748 312 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 SUOXP51687 545 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 TAS2R38P59533 333 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 P3H1Q32P28 736 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 CFAP58Q5T655 872 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 ZSWIM9Q86XI8 627 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 RBM15Q96T37 977 aaKnown RBP eCLIP23.81■■□□□ 1.4
HOMER3-201ENST00000221222 EPC1Q9H2F5 836 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 ABCA7Q8IZY2 2146 aa23.81■■□□□ 1.4
HOMER3-201ENST00000221222 C10orf142B7Z368 130 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 AP1G1O43747 822 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 PGLSO95336 258 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 SEMA4FO95754 770 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 PAFAH1B1P43034 410 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 POLR2LP62875 67 aaKnown RBP23.8■■□□□ 1.4
HOMER3-201ENST00000221222 UGP2Q16851 508 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 TTC7BQ86TV6 843 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 OR14C36Q8NHC7 312 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 SPATA22Q8NHS9 363 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 MAGOHBQ96A72 148 aaKnown RBP23.8■■□□□ 1.4
HOMER3-201ENST00000221222 ZC3H10Q96K80 434 aaKnown RBP23.8■■□□□ 1.4
HOMER3-201ENST00000221222 PCED1AQ9H1Q7 454 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 VPS45Q9NRW7 570 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 THADAQ6YHU6 1953 aa23.8■■□□□ 1.4
HOMER3-201ENST00000221222 UPK3BL1B0FP48 263 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 UPK3BL2E5RIL1 263 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 PHF2O75151 1096 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 NDUFS2O75306 463 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 ABL2P42684 1182 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 KCNJ1P48048 391 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 SPDYCQ5MJ68 293 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 ARMC12Q5T9G4 340 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 TTC27Q6P3X3 843 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 ARHGEF18Q6ZSZ5 1173 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 CADM4Q8NFZ8 388 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 OR2T34Q8NGX1 318 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 ATL2Q8NHH9 583 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 PPP1R2P1Q96PQ5 205 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 GPR174Q9BXC1 333 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 FAM153AQ9UHL3 310 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 PCDHB9Q9Y5E1 797 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 FADS3Q9Y5Q0 445 aa23.79■■□□□ 1.4
HOMER3-201ENST00000221222 LRRC72A6NJI9 287 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PDE2AO00408 941 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 AREL1O15033 823 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 SPINT1O43278 529 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 MAP3K13O43283 966 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 MT-CYBP00156 380 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PRLP01236 227 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 COILP38432 576 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 FNTAP49354 379 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 RPL26P61254 145 aaKnown RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 RPL6Q02878 288 aaKnown RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 LMNB2Q03252 620 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 SIM2Q14190 667 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PLK5Q496M5 336 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PMS2CLQ68D20 193 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 CEP68Q76N32 757 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 KLHDC8BQ8IXV7 354 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PDCD6IPQ8WUM4 868 aaKnown RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PIH1D2Q8WWB5 315 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 OXNAD1Q96HP4 312 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 GORASP1Q9BQQ3 440 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 DUSP15Q9H1R2 295 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PCDH9Q9HC56 1237 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PREBQ9HCU5 417 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms