RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 IL1R2P27930 398 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 RRM2P31350 389 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 RAD23AP54725 363 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 GJA9P57773 515 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 GPX6P59796 221 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 UNC5AQ6ZN44 842 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 ARMC8Q8IUR7 673 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 EMC1Q8N766 993 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 VPS33AQ96AX1 596 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 TMEM176AQ96HP8 235 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 CPNE5Q9HCH3 593 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 TRIM77I1YAP6 450 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 RNF103O00237 685 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 RNASEH2AO75792 299 aaKnown RBP13.74□□□□□ -0.21
GABPB1-201ENST00000220429 MICAL2O94851 1124 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 ATICP31939 592 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 DLG2Q15700 870 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 CHI3L2Q15782 390 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 SMTNL2Q2TAL5 461 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 MARCH8Q5T0T0 291 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 RSBN1Q5VWQ0 802 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-201ENST00000220429 CES4AQ5XG92 561 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 UTS2BQ765I0 119 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 POLNQ7Z5Q5 900 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 FNIP1Q8TF40 1166 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 DCAKDQ8WVC6 231 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 DLG3Q92796 817 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 CNDP2Q96KP4 475 aaKnown RBP13.74□□□□□ -0.21
GABPB1-201ENST00000220429 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 RAD21L1Q9H4I0 556 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 ZNF408Q9H9D4 720 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 TRIM39Q9HCM9 518 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 PSME2Q9UL46 239 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 PCP4L1A6NKN8 68 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 RFPL2O75678 378 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 ZMPSTE24O75844 475 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 NCAM1P13591 858 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 SLC9A3P48764 834 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CLCQ05315 142 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 SLC18A2Q05940 514 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CDC20Q12834 499 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 TMEM132DQ14C87 1099 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 HERC3Q15034 1050 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 SNX17Q15036 470 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 KCNT1Q5JUK3 1230 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 LYPD8Q6UX82 237 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 SIMC1Q8NDZ2 872 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 BHLHE22Q8NFJ8 381 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-201ENST00000220429 HPDLQ96IR7 371 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 SERAC1Q96JX3 654 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 EFHD1Q9BUP0 239 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CYP3A43Q9HB55 503 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 AKIP1Q9NQ31 210 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 POLE4Q9NR33 117 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 EIF3LQ9Y262 564 aaKnown RBP13.73□□□□□ -0.21
GABPB1-201ENST00000220429 DRG1Q9Y295 367 aaKnown RBP13.73□□□□□ -0.21
GABPB1-201ENST00000220429 TRIM64A6NGJ6 449 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 DNALI1O14645 258 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-201ENST00000220429 PRLP01236 227 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 PRKAA2P54646 552 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CDK10Q15131 360 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 TEX44Q53QW1 395 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 FSCBQ5H9T9 825 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 FAM182AQ5T1J6 154 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 MAP1SQ66K74 1059 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CYP20A1Q6UW02 462 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 FKBP9P1Q75LS8 142 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-201ENST00000220429 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CITED4Q96RK1 184 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 NARFLQ9H6Q4 476 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 ENPP5Q9UJA9 477 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CENPFP49454 3210 aa13.73□□□□□ -0.21
GABPB1-201ENST00000220429 CCL15-CCL14A0A0B4J2E2 113 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 M0QYV0 167 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 HTRA2O43464 458 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 ZNF254O75437 659 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 MFN2O95140 757 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 SMPD1P17405 629 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 MATN1P21941 496 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 CASP3P42574 277 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 ARSEP51690 589 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 FAAP100Q0VG06 881 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 GRIK4Q16099 956 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 CCL15Q16663 113 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 DUSP7Q16829 419 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 KIAA0408Q6ZU52 694 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 KCTD8Q6ZWB6 473 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 DGLUCYQ7Z3D6 616 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 S100ZQ8WXG8 99 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 NKD2Q969F2 451 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 MTG1Q9BT17 334 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 SEMA6AQ9H2E6 1030 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 SCPEP1Q9HB40 452 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 CAB39Q9Y376 341 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms