RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 LRRC73Q5JTD7 316 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 TEX35Q5T0J7 233 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 KCTD11Q693B1 232 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 PARS2Q7L3T8 475 aaKnown RBP27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 KLHDC8BQ8IXV7 354 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 LPCAT1Q8NF37 534 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 CPT1BQ92523 772 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 ECHDC3Q96DC8 303 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 RAB17Q9H0T7 212 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 LRRC40Q9H9A6 602 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 SNX24Q9Y343 169 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 C16orf96A6NNT2 1141 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 APBB3O95704 486 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 CPP00450 1065 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 AGTP01019 485 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 C5AR1P21730 350 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 IVDP26440 423 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 TNNT3P45378 269 aaPredicted RBP27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 IZUMO3Q5VZ72 239 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 AADATQ8N5Z0 425 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 GANCQ8TET4 914 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 FEM1CQ96JP0 617 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 TRIB3Q96RU7 358 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 PABPC3Q9H361 631 aaKnown RBP27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 ZDBF2Q9HCK1 2354 aa27.46■■□□□ 1.99
CHMP4B-201ENST00000217402 TCRBV7S3A2A0A539 114 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 DNALI1O14645 258 aaPredicted RBP27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 FZD6O60353 706 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 PRLP01236 227 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 ACADMP11310 421 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 CHRNA4P43681 627 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 RPL21P46778 160 aaKnown RBP27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 KCNJ11Q14654 390 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 ANKRD22Q5VYY1 191 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 SLC25A41Q8N5S1 370 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 SNF8Q96H20 258 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 TBL1YQ9BQ87 522 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 SERGEFQ9UGK8 458 aa27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 TPX2Q9ULW0 747 aaKnown RBP27.45■■□□□ 1.99
CHMP4B-201ENST00000217402 A0A1W2PP55 124 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 ERI2A8K979 691 aaKnown RBP27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 PSMD3O43242 534 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 RNASEH2AO75792 299 aaKnown RBP27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 PRKCGP05129 697 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 RHOXF2BP0C7M4 288 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 ADRA1AP35348 466 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 DRD3P35462 400 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 EPHB1P54762 984 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 CNTN1Q12860 1018 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 TTC31Q49AM3 519 aaPredicted RBP27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 GLE1Q53GS7 698 aaKnown RBP27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 DUPD1Q68J44 220 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 CCDC70Q6NSX1 233 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 BRAT1Q6PJG6 821 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 HDDC3Q8N4P3 179 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 RMDN1Q96DB5 314 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 RHOXF2Q9BQY4 288 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 TPSD1Q9BZJ3 242 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 CD93Q9NPY3 652 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 C11orf16Q9NQ32 467 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 EIF2B3Q9NR50 452 aaKnown RBP27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 DKK3Q9UBP4 350 aa27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 DMGDHQ9UI17 866 aaKnown RBP27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 ARIH1Q9Y4X5 557 aaPredicted RBP27.45■■□□□ 1.98
CHMP4B-201ENST00000217402 ESYT3A0FGR9 886 aa27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 TSPAN11A1L157 253 aa27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 GUCY2DQ02846 1103 aa27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 ZBTB16Q05516 673 aa27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 RNASEH2BQ5TBB1 312 aaKnown RBP27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 OMDQ99983 421 aa27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 ADGRE3Q9BY15 652 aa27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 PIH1D1Q9NWS0 290 aaKnown RBP27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 FBXL12Q9NXK8 326 aa27.44■■□□□ 1.98
CHMP4B-201ENST00000217402 LOC285095A0A1B0GVY8 99 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 K7ESF4 209 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 TMEM63AO94886 807 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 SEC31AO94979 1220 aaKnown RBP27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 NDST3O95803 873 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 XPAP23025 273 aaPredicted RBP27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 P2RY2P41231 377 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 GRIA1P42261 906 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 NAPEPLDQ6IQ20 393 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 FBXL19Q6PCT2 694 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 TSSK4Q6SA08 328 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 MAMSTRQ6ZN01 415 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 ERN2Q76MJ5 926 aaKnown RBP27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 PPIL6Q8IXY8 311 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 PIH1D2Q8WWB5 315 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 SMIM14Q96QK8 99 aa27.43■■□□□ 1.98
CHMP4B-201ENST00000217402 GOLGA8MH3BSY2 632 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 LAMTOR5O43504 91 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 ATXN1LP0C7T5 689 aaKnown RBP27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 CTPS1P17812 591 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 TPSB2P20231 275 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 NEK3P51956 506 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 TPSAB1Q15661 275 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 SLC1A5Q15758 541 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 SIRPB2Q5JXA9 342 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 PPP1R21Q6ZMI0 780 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms