RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PCDHB12Q9Y5F1 795 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 OLFM2O95897 454 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 ARRB2P32121 409 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 CLCN5P51795 746 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 PRKAA2P54646 552 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 TAS2R39P59534 338 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 ZYG11AQ6WRX3 759 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 CILP2Q8IUL8 1156 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 BRSK1Q8TDC3 778 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 ELMO2Q96JJ3 720 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 NMUR2Q9GZQ4 415 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 ACTL7AQ9Y615 435 aa29.9■■■□□ 2.38
PABPN1-201ENST00000216727 A0A087X1B8 175 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 NDST3O95803 873 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 CR2P20023 1033 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 CES1P23141 567 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 GLDCP23378 1020 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 AVPR1AP37288 418 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 ILF2Q12905 390 aaKnown RBP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 CXorf57Q6NSI4 855 aaKnown RBP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 ATG14Q6ZNE5 492 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 ALYREFQ86V81 257 aaKnown RBP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 TMEM199Q8N511 208 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 KCTD4Q8WVF5 259 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 ARMC5Q96C12 935 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 PTCD3Q96EY7 689 aaKnown RBP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 IL21Q9HBE4 155 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 NOD2Q9HC29 1040 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 ZNF334Q9HCZ1 680 aaPredicted RBP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 RUVBL2Q9Y230 463 aaKnown RBP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 PLXNA4Q9HCM2 1894 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 TSPAN3O60637 253 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 CCDC22O60826 627 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 RAG1P15918 1043 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 NUMBP49757 651 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 SMAD3P84022 425 aaKnown RBP29.89■■■□□ 2.38
PABPN1-201ENST00000216727 TSNAXIP1Q2TAA8 658 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 CNSTQ6PJW8 725 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 GPATCH11Q8N954 259 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 STYXQ8WUJ0 223 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 HDAC10Q969S8 669 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 NSL1Q96IY1 281 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 GPR78Q96P69 363 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 OMDQ99983 421 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 SMPD4Q9NXE4 827 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 ASB3Q9Y575 518 aa29.89■■■□□ 2.38
PABPN1-201ENST00000216727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP29.88■■■□□ 2.37
PABPN1-201ENST00000216727 KLHL2O95198 593 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 SBK3P0C264 359 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 ALOX15P16050 662 aaPredicted RBP29.88■■■□□ 2.37
PABPN1-201ENST00000216727 PTPN4P29074 926 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 ARSDP51689 593 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 PRAMEP78395 509 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 PRR11Q96HE9 360 aaPredicted RBP29.88■■■□□ 2.37
PABPN1-201ENST00000216727 ARL8BQ9NVJ2 186 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 CPSF2Q9P2I0 782 aaKnown RBP29.88■■■□□ 2.37
PABPN1-201ENST00000216727 ARIH1Q9Y4X5 557 aaPredicted RBP29.88■■■□□ 2.37
PABPN1-201ENST00000216727 TARM1B6A8C7 271 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 AURKAO14965 403 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 INSIG1O15503 277 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 SLC12A2P55011 1212 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 SLC20A2Q08357 652 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 TTC7BQ86TV6 843 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 FSTL5Q8N475 847 aaPredicted RBP29.88■■■□□ 2.37
PABPN1-201ENST00000216727 OR6P1Q8NGX9 317 aa29.88■■■□□ 2.37
PABPN1-201ENST00000216727 TK2O00142 265 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 GREM1O60565 184 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 GALNT3Q14435 633 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 CYTH1Q15438 398 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 RNF219Q5W0B1 726 aaPredicted RBP29.87■■■□□ 2.37
PABPN1-201ENST00000216727 LRRC8EQ6NSJ5 796 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 FBXO46Q6PJ61 603 aaPredicted RBP29.87■■■□□ 2.37
PABPN1-201ENST00000216727 NAPRTQ6XQN6 538 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 PTAR1Q7Z6K3 402 aaPredicted RBP29.87■■■□□ 2.37
PABPN1-201ENST00000216727 BLOC1S5Q8TDH9 187 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 SLC22A12Q96S37 553 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 CYP2S1Q96SQ9 504 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 ZBP1Q9H171 429 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 TRPC7Q9HCX4 862 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 SSX2IPQ9Y2D8 614 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 BPTFQ12830 3046 aa29.87■■■□□ 2.37
PABPN1-201ENST00000216727 ACRP10323 421 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 CALB2P22676 271 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 RGRP47804 291 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 PGGT1BP53609 377 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 SNCBQ16143 134 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 ZNF789Q5FWF6 425 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 LIPMQ5VYY2 423 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 C16orf59Q7L2K0 433 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 ADAMTS19Q8TE59 1207 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 UTP4Q969X6 686 aaKnown RBP29.86■■■□□ 2.37
PABPN1-201ENST00000216727 MUC3BQ9H195 1237 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 KCTD3Q9Y597 815 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 CBX4O00257 560 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 GFRA2O00451 464 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 C1RP00736 705 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 SERPINA6P08185 405 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 CTSAP10619 480 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 KPNA2P52292 529 aaKnown RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms