RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 TSEN15Q8WW01 171 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 OSGEPQ9NPF4 335 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ANKEF1Q9NU02 776 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 BARX2Q9UMQ3 279 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 FAM25EA8MYX2 175 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 DNALI1O14645 258 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 ADAMTS3O15072 1205 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SNRPAP09012 282 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 PVALBP20472 110 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 AMPD1P23109 780 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TNFSF4P23510 183 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 NAMPTP43490 491 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ACOT2P49753 483 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 CCL23P55773 120 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SCGB2A2Q13296 93 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TTC33Q6PID6 262 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 OTOP3Q7RTS5 596 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 CHST4Q8NCG5 386 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PIK3C3Q8NEB9 887 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 RAD54LQ92698 747 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SCGB3A2Q96PL1 93 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 OSBPL8Q9BZF1 889 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 RANBP17Q9H2T7 1088 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 ST3GAL5Q9UNP4 418 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 CFL2Q9Y281 166 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 AP4S1Q9Y587 144 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 UMODL1Q5DID0 1318 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 HHLA1C9JL84 531 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ZNF35P13682 527 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ZNF23P17027 643 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ZNF200P98182 395 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 ZNF155Q12901 538 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 DGLUCYQ7Z3D6 616 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TMEM17Q86X19 198 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ZNF611Q8N823 705 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PNLDC1Q8NA58 520 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 AP3S1Q92572 193 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 AP2M1Q96CW1 435 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 CLN6Q9NWW5 311 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SERTAD3Q9UJW9 196 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PTPN23Q9H3S7 1636 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TBL1XO60907 577 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ACADSP16219 412 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 GAD2Q05329 585 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 LARS2Q15031 903 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 NFRKBQ6P4R8 1299 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 COMMD4Q9H0A8 199 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 POPDC2Q9HBU9 364 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PIGBOS1A0A0B4J2F0 54 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 B8ZZF3 427 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 BHMG1C9JSJ3 638 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 F8VZ95 297 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TP53P04637 393 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 ECHS1P30084 290 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PIK3CBP42338 1070 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 RHBDL3P58872 404 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PTCH1Q13635 1447 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 CCDC153Q494R4 210 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 RNASEH2BQ5TBB1 312 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 PLEKHA7Q6IQ23 1121 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TPGS1Q6ZTW0 290 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SAMD7Q7Z3H4 446 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 LRRC6Q86X45 466 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SMARCD1Q96GM5 515 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ELOVL4Q9GZR5 314 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 LRFN1Q9P244 771 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TPRKBQ9Y3C4 175 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 FARP2O94887 1054 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 WEE2P0C1S8 567 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 GRK6P43250 576 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 RPS9P46781 194 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 ZNF844Q08AG5 666 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ZBTB6Q15916 424 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TIMM50Q3ZCQ8 353 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 LANCL3Q6ZV70 420 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ARHGAP12Q8IWW6 846 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SLAIN1Q8ND83 568 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ERP27Q96DN0 273 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 C16orf58Q96GQ5 468 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ARL5BQ96KC2 179 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 C17orf75Q9HAS0 396 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 WBP11Q9Y2W2 641 aaKnown RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 HSPA12AO43301 675 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PPP1R37O75864 691 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SDHBP21912 280 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 BUD31P41223 144 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 ZNF135P52742 658 aaPredicted RBP3.47□□□□□ -1.85
NEB-201ENST00000172853 PLIN5Q00G26 463 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 PDK2Q15119 407 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TMEM156Q8N614 296 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 POC5Q8NA72 575 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 OR14C36Q8NHC7 312 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 ADAMTS15Q8TE58 950 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SLC22A17Q8WUG5 538 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 MS4A14Q96JA4 679 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 CLDND1Q9NY35 253 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 VPS4AQ9UN37 437 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 TSC22D4Q9Y3Q8 395 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 MLH3Q9UHC1 1453 aa3.47□□□□□ -1.85
NEB-201ENST00000172853 SHANK2Q9UPX8 1470 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms