RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CAMKK1Q8N5S9 505 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 USP7Q93009 1102 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 RCN3Q96D15 328 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 REPS1Q96D71 796 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 GRIP2Q9C0E4 1043 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 UBXN8O00124 270 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 HDAC3O15379 428 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 C1RP00736 705 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 ABHD2P08910 425 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 LMO2P25791 158 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 SOX6P35712 828 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 ZC3H7AQ8IWR0 971 aaKnown RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 ZNF276Q8N554 614 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 APOBEC3GQ9HC16 384 aaKnown RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 H3BMM5 538 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 SNRPB2P08579 225 aaKnown RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 PABPC1P11940 636 aaKnown RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 DRD4P21917 467 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 ATXN1P54253 815 aaKnown RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 NRG1Q02297 640 aaPredicted RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 PROX1Q92786 737 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 MYBPHLA2RUH7 354 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 IQCF5A8MTL0 148 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 C1DQ13901 141 aaKnown RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 CCDC185Q8N715 623 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 OR4K2Q8NGD2 314 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 MAML3Q96JK9 1138 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 MRPL57Q9BQC6 102 aaKnown RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 WRAP73Q9P2S5 460 aaPredicted RBP18.94■□□□□ 0.62
MBD3-201ENST00000156825 EGFL7Q9UHF1 273 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 NR2E1Q9Y466 385 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 VPS4BO75351 444 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 C2P06681 752 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 PSME3P61289 254 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 PAGE2BQ5JRK9 111 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 ZNF662Q6ZS27 426 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 MON1BQ7L1V2 547 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 SLC4A5Q9BY07 1137 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.94■□□□□ 0.622e-7■■■□□ 17.3
MBD3-201ENST00000156825 C15orf41Q9Y2V0 281 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 NR2E3Q9Y5X4 410 aa18.94■□□□□ 0.62
MBD3-201ENST00000156825 ERAL1O75616 437 aaKnown RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 KCNH1O95259 989 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 AMD1P17707 334 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 PPM1JQ5JR12 505 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 ZCCHC8Q6NZY4 707 aaKnown RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 SLC24A5Q71RS6 500 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 ACTRT2Q8TDY3 377 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 B3GALT6Q96L58 329 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 C6orf62Q9GZU0 229 aaPredicted RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 LRCH1Q9Y2L9 728 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 MAFBQ9Y5Q3 323 aaPredicted RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 TEX44Q53QW1 395 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 TRAF7Q6Q0C0 670 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 GPRIN3Q6ZVF9 776 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 STRADAQ7RTN6 431 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 PIWIL4Q7Z3Z4 852 aaKnown RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 CPNE8Q86YQ8 564 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 SLC4A11Q8NBS3 891 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 COPS8Q99627 209 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 SIKE1Q9BRV8 207 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 ANAPC2Q9UJX6 822 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 MRC1P22897 1456 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 FNBP1LQ5T0N5 605 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 CLHC1Q8NHS4 586 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 KLHL1Q9NR64 748 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 SNX6Q9UNH7 406 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 ASF1AQ9Y294 204 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 SPIDRQ14159 915 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 DLG2Q15700 870 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 NPY5RQ15761 445 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 FAM187BQ17R55 369 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 TTC27Q6P3X3 843 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 AMIGO2Q86SJ2 522 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 DQX1Q8TE96 717 aaKnown RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 RNFT2Q96EX2 444 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 PCED1BQ96HM7 432 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 UGT2B4P06133 528 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 GTF2E2P29084 291 aaKnown RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 CORO1AP31146 461 aaKnown RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 MBTD1Q05BQ5 628 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 ANKRD22Q5VYY1 191 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 SPOCK2Q92563 424 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 CENPTQ96BT3 561 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 NIFKQ9BYG3 293 aaKnown RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 NDEL1Q9GZM8 345 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 SOHLH2Q9NX45 425 aa18.93■□□□□ 0.62
MBD3-201ENST00000156825 EVLQ9UI08 416 aaPredicted RBP18.93■□□□□ 0.62
MBD3-201ENST00000156825 QPCTQ16769 361 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 COLGALT2Q8IYK4 626 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 C1QTNF7Q9BXJ2 289 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 PRDM16Q9HAZ2 1276 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 AASDHPPTQ9NRN7 309 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 ATP6V1HQ9UI12 483 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 LYVE1Q9Y5Y7 322 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.92■□□□□ 0.62
MBD3-201ENST00000156825 CEP78Q5JTW2 689 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 GPR158Q5T848 1215 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 MFSD3Q96ES6 412 aa18.92■□□□□ 0.62
MBD3-201ENST00000156825 ACTL7BQ9Y614 415 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms