RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 GALNT18Q6P9A2 607 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ZC3HC1Q86WB0 502 aaKnown RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ZC3H7AQ8IWR0 971 aaKnown RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ARL10Q8N8L6 244 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 KDM1BQ8NB78 822 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 SGCDQ92629 289 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 PLGRKTQ9HBL7 147 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 NUP214P35658 2090 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 FBP2O00757 339 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ATP5BP06576 529 aaKnown RBP16.87■□□□□ 0.29
CTDP1-201ENST00000075430 YBX3P16989 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTDP1-201ENST00000075430 OXTRP30559 389 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 CDK9P50750 372 aaKnown RBP16.87■□□□□ 0.29
CTDP1-201ENST00000075430 BST2Q10589 180 aaKnown RBP16.87■□□□□ 0.29
CTDP1-201ENST00000075430 RABL3Q5HYI8 236 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 EXOC8Q8IYI6 725 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 SMYD1Q8NB12 490 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 NAT9Q9BTE0 207 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ULBP1Q9BZM6 244 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ZNF112Q9UJU3 913 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ST14Q9Y5Y6 855 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 SHROOM3Q8TF72 1996 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 SNRPB2P08579 225 aaKnown RBP16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ELK4P28324 431 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ICAM3P32942 547 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 NR1D2Q14995 579 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 STEAP4Q687X5 459 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 TMEM110Q86TL2 294 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 CUZD1Q86UP6 607 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 PIM3Q86V86 326 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 SLCO4A1Q96BD0 722 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 TMEM74Q96NL1 305 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 PLEKHA5Q9HAU0 1116 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 TIMM22Q9Y584 194 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 FZD9O00144 591 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ANGPT2O15123 496 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 NRP2O60462 931 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 CABYRO75952 493 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 LINC00032P0C843 101 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 CD68P34810 354 aaPredicted RBP16.87■□□□□ 0.29
CTDP1-201ENST00000075430 HSPA13P48723 471 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 PTPRCAPQ14761 206 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 KCTD8Q6ZWB6 473 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ARMCX2Q7L311 632 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 PSD4Q8NDX1 1056 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 RNF145Q96MT1 663 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 ADI1Q9BV57 179 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 COQ6Q9Y2Z9 468 aa16.87■□□□□ 0.29
CTDP1-201ENST00000075430 TGFB3P10600 412 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 VARSP26640 1264 aaKnown RBP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 RHDQ02161 417 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 APOFQ13790 326 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 PRAMEF19Q5SWL8 479 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 RALGPS2Q86X27 583 aaPredicted RBP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 C1orf50Q9BV19 199 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 BLOC1S6Q9UL45 172 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 FZD10Q9ULW2 581 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 BRCA2P51587 3418 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 YJEFN3A6XGL0 299 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 ERI2A8K979 691 aaKnown RBP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 DYNC1LI2O43237 492 aaPredicted RBP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 LGALS2P05162 132 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 EEF1DP29692 281 aaKnown RBP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 TMED10P49755 219 aaKnown RBP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 CYP2A13Q16696 494 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 ASB9Q96DX5 294 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 TMEM114B3SHH9 223 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 SNAP29O95721 258 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 AP2A1O95782 977 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 IL10P22301 178 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 MATKP42679 507 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 NUP107P57740 925 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 NSUN2Q08J23 767 aaKnown RBP eCLIP16.86■□□□□ 0.29
CTDP1-201ENST00000075430 GRM1Q13255 1194 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 DLG3Q92796 817 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 SLC10A4Q96EP9 437 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 OSBPL2Q9H1P3 480 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 ADAMTS5Q9UNA0 930 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 FADS3Q9Y5Q0 445 aa16.86■□□□□ 0.29
CTDP1-201ENST00000075430 DHRS12A0PJE2 317 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 SLC1A2P43004 574 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 RAB10P61026 200 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 SULT2A1Q06520 285 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 PIWIL3Q7Z3Z3 882 aaKnown RBP16.85■□□□□ 0.29
CTDP1-201ENST00000075430 MFSD6LQ8IWD5 586 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 C3orf30Q96M34 536 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 SACM1LQ9NTJ5 587 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 TSC22D4Q9Y3Q8 395 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 COMMD10Q9Y6G5 202 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 A0A087WXM4 84 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 GOLGA8CPA6NN73 597 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 H3BRB1 525 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 MLNP12872 115 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 GPR158Q5T848 1215 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 RAVER1Q8IY67 606 aaKnown RBP16.85■□□□□ 0.29
CTDP1-201ENST00000075430 CLEC4FQ8N1N0 589 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms