RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 LVRNQ6Q4G3 990 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 PSTKQ8IV42 348 aaKnown RBP16.04■□□□□ 0.16
ERCC1-201ENST00000013807 ARFGAP1Q8N6T3 406 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 WDR48Q8TAF3 677 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 CXorf40AQ8TE69 158 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 FNIP1Q8TF40 1166 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 TUBGCP5Q96RT8 1024 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 IL12RB2Q99665 862 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 ABCG4Q9H172 646 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 SUV39H2Q9H5I1 410 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 POLR1BQ9H9Y6 1135 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 MBNL1Q9NR56 388 aaKnown RBP16.04■□□□□ 0.16
ERCC1-201ENST00000013807 PARVAQ9NVD7 372 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 SCN8AQ9UQD0 1980 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 INSIG1O15503 277 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 CSO75390 466 aaKnown RBP16.03■□□□□ 0.16
ERCC1-201ENST00000013807 TCEA3O75764 348 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 GZMAP12544 262 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 MYF5P13349 255 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 ATP1A3P13637 1013 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 DESP17661 470 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 ITIH2P19823 946 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 TGM2P21980 687 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 HCAR3P49019 387 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 BLKP51451 505 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 NSUN2Q08J23 767 aaKnown RBP eCLIP16.03■□□□□ 0.16
ERCC1-201ENST00000013807 KLHL40Q2TBA0 621 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 C6orf132Q5T0Z8 1188 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 BRAT1Q6PJG6 821 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 VPS36Q86VN1 386 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 PHACTR4Q8IZ21 702 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 ZNF248Q8NDW4 579 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 MAPK15Q8TD08 544 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 LMX1AQ8TE12 382 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 SPOCK2Q92563 424 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 LRRC61Q9BV99 259 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 SLC13A1Q9BZW2 595 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 ASCL3Q9NQ33 180 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 AIPL1Q9NZN9 384 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 UBA2Q9UBT2 640 aaPredicted RBP16.03■□□□□ 0.16
ERCC1-201ENST00000013807 APOBEC3BQ9UH17 382 aaKnown RBP16.03■□□□□ 0.16
ERCC1-201ENST00000013807 RAI2Q9Y5P3 530 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 AHCTF1Q8WYP5 2266 aa16.03■□□□□ 0.16
ERCC1-201ENST00000013807 TMEM191CA6NGB0 347 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 J3KR12 359 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 BUB1BO60566 1050 aaPredicted RBP16.02■□□□□ 0.16
ERCC1-201ENST00000013807 USP12O75317 370 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 RPIAP49247 311 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 ZNF135P52742 658 aaPredicted RBP16.02■□□□□ 0.16
ERCC1-201ENST00000013807 TPI1P60174 286 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 SKOR1P84550 965 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 LRRC14Q15048 493 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 NR0B2Q15466 257 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 CDKN3Q16667 212 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 WSCD2Q2TBF2 565 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 DEFB133Q30KQ1 61 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 PRRT3Q5FWE3 981 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 LRRC73Q5JTD7 316 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 ERMARDQ5T6L9 678 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 GUSBP11Q6P575 273 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 ZNF354CQ86Y25 554 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 SPACA3Q8IXA5 215 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 RBFAQ8N0V3 343 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 FSTL5Q8N475 847 aaPredicted RBP16.02■□□□□ 0.16
ERCC1-201ENST00000013807 GLMNQ92990 594 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 NAT6Q93015 286 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 ECHDC3Q96DC8 303 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 BPIFA3Q9BQP9 254 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 CLPBQ9H078 707 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 TCEAL2Q9H3H9 227 aaPredicted RBP16.02■□□□□ 0.16
ERCC1-201ENST00000013807 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.16
ERCC1-201ENST00000013807 SEPT11Q9NVA2 429 aaKnown RBP16.02■□□□□ 0.16
ERCC1-201ENST00000013807 TAS2R14Q9NYV8 317 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 PCDHGA8Q9Y5G5 932 aa16.02■□□□□ 0.16
ERCC1-201ENST00000013807 TEX51A0A1B0GUA7 166 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 ARHGAP42A6NI28 874 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 ATXN7O15265 892 aaPredicted RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 YY2O15391 372 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 MPOP05164 745 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 TSHRP16473 764 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 TNFAIP3P21580 790 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 MMP12P39900 470 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 PRKCIP41743 596 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 MLLT3P42568 568 aaPredicted RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 HK3P52790 923 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 ADKP55263 362 aaKnown RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 PCBP4P57723 403 aaKnown RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 GABREP78334 506 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 PPARDQ03181 441 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 RFTN1Q14699 578 aaPredicted RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 IRF4Q15306 451 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 CCDC183Q5T5S1 534 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 CYP4V2Q6ZWL3 525 aaPredicted RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 EFL1Q7Z2Z2 1120 aaKnown RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 SLC35F3Q8IY50 421 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 SNRNP27Q8WVK2 155 aaKnown RBP16.01■□□□□ 0.15
ERCC1-201ENST00000013807 SLC46A1Q96NT5 459 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 NCAPGQ9BPX3 1015 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms