RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PAIP1Q9H074 479 aaKnown RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PITPNM1O00562 1244 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SLC30A4O14863 429 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CYP7B1O75881 506 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ACVR2BQ13705 512 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SEC23AQ15436 765 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 UBE2SQ16763 222 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 C9orf43Q8TAL5 461 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SPPL2AQ8TCT8 520 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 DNAJA4Q8WW22 397 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 FAM151AQ8WW52 585 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 RAB9BQ9NP90 201 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TRPV5Q9NQA5 729 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 GPRC5DQ9NZD1 345 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ADGRE2Q9UHX3 823 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 HEBP2Q9Y5Z4 205 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SLIT3O75094 1523 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PI4KAP42356 2102 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 A0A0A0MRY4 1105 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SUV39H1O43463 412 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ATP5F1P24539 256 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SLC16A2P36021 539 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SLC1A2P43004 574 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ATP13A4Q4VNC1 1196 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 FAM91A1Q658Y4 838 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RTL4Q6ZR62 310 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ANKRD23Q86SG2 305 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SH3RF3Q8TEJ3 882 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CPA5Q8WXQ8 436 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SPATA13Q96N96 652 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SEPT5Q99719 369 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CHST12Q9NRB3 414 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 COPZ2Q9P299 210 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PTBP2Q9UKA9 531 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 INPP5FQ9Y2H2 1132 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 VSTM5A8MXK1 200 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RIPK2O43353 540 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ARPC4P59998 168 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SF3B3Q15393 1217 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZC2HC1CQ53FD0 456 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PCID2Q5JVF3 399 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 BAIAP2L2Q6UXY1 529 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RAB43Q86YS6 212 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RBFAQ8N0V3 343 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PACRGLQ8N7B6 248 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CNTD1Q8N815 330 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 HSFY1Q96LI6 401 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZFP57Q9NU63 452 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 R3HDM2Q9Y2K5 976 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RAP2CQ9Y3L5 183 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DOCK7Q96N67 2140 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DHRS12A0PJE2 317 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 GSG1L2A8MUP6 293 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PVALBP20472 110 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CEBPAP49715 358 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 AFTPHQ6ULP2 937 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 MILR1Q7Z6M3 343 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ADGRD2Q7Z7M1 963 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SPATA9Q9BWV2 254 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 VPS28Q9UK41 221 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHB1Q9Y5F3 818 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RPTORQ8N122 1335 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 UBXN7O94888 489 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 TACSTD2P09758 323 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 UBTFL6P0CB48 400 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 HOXC12P31275 282 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 MVKQ03426 396 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DENND5AQ6IQ26 1287 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CNSTQ6PJW8 725 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 COMMD2Q86X83 199 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ABRAQ8N0Z2 381 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 C17orf50Q8WW18 174 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 AGAP3Q96P47 875 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 M0QX08 132 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 TLX3O43711 291 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 KAT7O95251 611 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 GNAZP19086 355 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 MAPK10P53779 464 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF211Q13398 564 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 LARS2Q15031 903 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZFPM1Q8IX07 1006 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ETNPPLQ8TBG4 499 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DPF3Q92784 378 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CLP1Q92989 425 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 HAO1Q9UJM8 370 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 TMEM94Q12767 1356 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DNAJB6O75190 326 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CKMP06732 381 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PRKCIP41743 596 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 TCEAL6Q6IPX3 200 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 C12orf56Q8IXR9 622 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PNLDC1Q8NA58 520 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 NXF3Q9H4D5 531 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 POPDC2Q9HBU9 364 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 KCNQ5Q9NR82 932 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 FNIP2Q9P278 1114 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DMGDHQ9UI17 866 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CARD8Q9Y2G2 431 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DERAQ9Y315 318 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms