RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 CopaQ8CIE6 1224 aaKnown RBP13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Exd2Q8VEG4 650 aaKnown RBP13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Olfr1414Q8VGU5 312 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Necab2Q91ZP9 389 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 MydgfQ9CPT4 166 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Det1Q9D0A0 550 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Apoa4P06728 395 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tas2r16P59529 299 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rab10P61027 200 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 PrkcgP63318 697 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Sephs2P97364 452 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Arhgap45Q3TBD2 1116 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Slc9b2Q5BKR2 547 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 CyldQ80TQ2 952 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Q8BP99 230 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Vps37aQ8CHS8 397 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Nsl1Q8K305 281 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Adcy4Q91WF3 1077 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 FopnlQ9CZS3 174 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Numa1E9Q7G0 2094 aaKnown RBP13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Umodl1Q5DID3 1319 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Zfp811A0A0J9YU71 552 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rap1gds1E9Q912 607 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 ItgalP24063 1163 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Pdha1P35486 390 aaKnown RBP13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rpl36P47964 105 aaKnown RBP13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 G2e3Q5RJY2 716 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Olfr464Q5SW48 313 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Crtc1Q68ED7 630 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 AtminQ6P9S1 818 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Abi3Q8BYZ1 367 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Smoc2Q8CD91 447 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Sugp1Q8CH02 643 aaKnown RBP13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Mark4Q8CIP4 752 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fam151aQ8QZW3 608 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Zbtb44Q8R0A2 453 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Pcdhb6Q91XZ4 772 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 CrebzfQ91ZR3 358 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Pramel1Q99MW3 458 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Nif3l1Q9EQ80 376 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ptk2bQ9QVP9 1009 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Asb1Q9WV74 336 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Sppl2cA2A6C4 690 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Nipsnap3aB1AWZ3 247 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Olfr600E9PUN7 314 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Vmn2r111K7N674 857 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Guca1aP43081 202 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Snrpd1P62315 119 aaKnown RBP13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gpr17Q6NS65 339 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ankzf1Q80UU1 748 aaKnown RBP13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ubp1Q811S7 540 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ing3Q8VEK6 421 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 5530400C23RikQ9D3I0 173 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Dusp6Q9DBB1 381 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 RhojQ9ER71 214 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Slc25a13Q9QXX4 676 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tsc2Q61037 1814 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 4921501E09RikA0A0R4J054 908 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gm14781A2A9Q9 366 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Nsmce4aG3XA30 381 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Hnrnph1O35737 449 aaKnown RBP13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Mageb5Q14AN0 366 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Foxr1Q3UTB7 268 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 H2-Q2Q4KN81 360 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Slc39a4Q78IQ7 660 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Q8BZE1 841 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Lrrc19Q8BZT5 364 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Sit1Q8C503 180 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 SntnQ8C9X1 147 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 HibchQ8QZS1 385 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Catsper1Q91ZR5 686 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Kif19Q99PT9 997 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Lrrc40Q9CRC8 602 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tchhl1Q9D3P1 638 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 GabrqQ9JLF1 638 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Pias4Q9JM05 507 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gria4Q9Z2W8 902 aa13.47□□□□□ -0.25
Clcn3-204ENSMUST00000110301 CartptP56388 129 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cd163Q2VLH6 1121 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Q32P12 615 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cyb5r4Q3TDX8 528 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fubp3Q3TIX6 575 aaKnown RBP13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Xlr3aQ60595 226 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Zswim9Q6DI92 447 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tatdn1Q6P8M1 295 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Dnajc16Q80TN4 772 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gpat3Q8C0N2 438 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Slc47a1Q8K0H1 567 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ddx1Q91VR5 740 aaKnown RBP13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Sun1Q9D666 913 aaKnown RBP13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Vmn1r49Q9WUF1 310 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ern2Q9Z2E3 911 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Srsf11E9Q6E5 511 aaKnown RBP13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gm11236J3QMS7 360 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 PrkcdP28867 674 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Atp5bP56480 529 aaKnown RBP13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 PtpaP58389 323 aa13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Abce1P61222 599 aaKnown RBP13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Crnkl1P63154 690 aaKnown RBP13.46□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tbx1P70323 479 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms