RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Zfc3h1B2RT41 1992 aaKnown RBP9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Kif6E9PX57 802 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr743L7N1Y2 311 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cd2P08920 344 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Nploc4P60670 608 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 NficP70255 439 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Hsdl2Q2TPA8 490 aaKnown RBP9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm5800Q497L3 186 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Adora2bQ60614 332 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Smarcd1Q61466 515 aaKnown RBP9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Dnajc1Q61712 552 aaKnown RBP9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tigd3Q7TM95 470 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Prkaa2Q8BRK8 552 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tbc1d17Q8BYH7 645 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Vps26bQ8C0E2 336 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pabpc5Q8C7D3 381 aaKnown RBP9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Nck1Q99M51 377 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 MajinQ9D992 256 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tbc1d21Q9D9D3 336 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Ppp1r2Q9DCL8 206 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Sept5Q9Z2Q6 369 aa9.8□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 CercamA3KGW5 592 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Dthd1E9PZX1 795 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm2237E9Q501 211 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 1600015I10RikE9Q745 711 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Zbtb10E9Q8X5 861 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm3591K7N6X2 186 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 ClockO08785 855 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Krt4P07744 525 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Clec4fP70194 548 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Fbp2P70695 339 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Rbp1Q00915 135 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 MogQ61885 246 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Rab3ipQ68EF0 428 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr867Q7TRF3 331 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Snx32Q80ZJ7 404 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 StgQ8BM15 349 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 BoraQ8BS90 525 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 TpbglQ8C013 384 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Abi1Q8CBW3 481 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 B4galt3Q91YY2 395 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 BlvraQ9CY64 295 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Fam83dQ9D7I8 585 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 NvlQ9DBY8 855 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pi16Q9ET66 489 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Abcb9Q9JJ59 762 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Sf3b1Q99NB9 1304 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm6509A0A0J9YUV1 481 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr1160A2AVT0 319 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Acp4D3YTS9 425 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 JhyE9Q793 770 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm6351K9J7D1 481 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr1022L7MTT3 315 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Got2P05202 430 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tas2r16P59529 299 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Mc1rQ01727 315 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cyp2d40Q6P8N9 338 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gja6Q6S5G4 283 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr20Q7TRX9 314 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Nim1kQ8BHI9 436 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cybrd1Q925G2 290 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Trim16Q99PP9 556 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pmf1Q9CPV5 202 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Zbtb12Q9Z150 459 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm3383J3QQ59 259 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm3164L7N2B9 238 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm3239L7N2D9 227 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Dpysl2O08553 572 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Vmn2r1O70410 912 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Dnajb14Q149L6 379 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Axdnd1Q3UZ57 424 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Mthfd1lQ3V3R1 977 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr463Q5SW49 311 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr462Q5SW50 311 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Jak2Q62120 1129 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Six3Q62233 333 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Vps72Q62481 368 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Nomo1Q6GQT9 1214 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Ggnbp1Q6K1E7 370 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tmem209Q8BRG8 561 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Usp43Q8BUM9 1132 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 NamptQ99KQ4 491 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Sike1Q9CPR7 207 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Ogfod2Q9CQ04 349 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Q9CR55 154 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Klhl35Q9CZ49 574 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gsdmdc1Q9D8T2 487 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 CtsmQ9JL96 333 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 M1apQ9Z0E1 529 aa9.79□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pnldc1B2RXZ1 531 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm21293E9Q4G9 266 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm17175E9Q528 179 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gm3739L7N296 216 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Matn2O08746 956 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tnk2O54967 1055 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Oaz1P54369 227 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 WasP70315 520 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cdh9P70407 786 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 ErfP70459 551 aa9.78□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cyp2j13Q3UNV4 503 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms