RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Steap3Q8CI59 488 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Med24Q99K74 987 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mospd2Q9CWP6 518 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Zfp655Q9CZP3 541 aaKnown RBP9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Fam174aQ9D3L0 190 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Fam83dQ9D7I8 585 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Echdc1Q9D9V3 322 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Poc5Q9DBS8 558 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nipa2Q9JJC8 359 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Bpifb9bA2AJD1 591 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Zfp949E9Q732 603 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Hmgxb3G3X9M3 1254 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Fcer2P20693 331 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ctu2Q3U308 514 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Heatr9Q5QNV8 569 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 ClpbQ60649 677 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Aldh1a2Q62148 518 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Sema3cQ62181 751 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 TifaQ793I8 184 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 ZfatQ7TS63 1237 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 HeltQ7TS99 240 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mgat4bQ812F8 548 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Zfp438Q8BFX2 798 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 B4gat1Q8BWP8 415 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 PxkQ8BX57 582 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tph2Q8CGV2 488 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Myl6bQ8CI43 207 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ints9Q8K114 658 aaKnown RBP9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ak6Q8VCP8 172 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Havcr2Q8VIM0 281 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Grtp1Q9D3N8 359 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Atp5hQ9DCX2 161 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Hnf4gQ9WUU6 408 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rock1P70335 1354 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Scgb2b11A0A087WR49 112 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Olfr1326-ps1A0A140T8J7 311 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Pcdh1F7BJK1 1077 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 SgcgP82348 291 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Pm20d1Q8C165 503 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Leng8Q8CBY3 785 aaKnown RBP9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Odf4Q8VI88 290 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 NlnQ91YP2 704 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tnfaip8Q921Z5 198 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Thumpd1Q99J36 350 aaKnown RBP9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 HypkQ9CR41 129 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Lonp2Q9DBN5 852 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Dnajc10Q9DC23 793 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Smok1Q9QYZ4 484 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Sos2Q02384 1333 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Slc25a25A2ASZ8 469 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cyp19a1P28649 503 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nr5a2P45448 560 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Adcyap1r1P70205 496 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 MocosQ14CH1 862 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 SbplQ3TUY3 232 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cldn34b4Q3V0X2 211 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Phc1Q64028 1012 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ptbp3Q8BHD7 523 aaKnown RBP9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Trmt2bQ8BQJ6 493 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Efcab8Q8C9R9 203 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Olfr1453Q8VFX0 307 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ms4a6cQ99N08 217 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Drap1Q9D6N5 205 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Aurkaip1Q9DCJ7 200 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Arfgap1Q9EPJ9 414 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mbnl1Q9JKP5 341 aaKnown RBP9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Hs6st1Q9QYK5 411 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tbc1d4Q8BYJ6 1307 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Srp54bE9PXC0 504 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cyp2a5P20852 494 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 GiprQ0P543 460 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cbx5Q61686 191 aaKnown RBP9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ptk6Q64434 451 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Colec12Q8K4Q8 742 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Pdia5Q921X9 517 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 HaghlQ9DB32 283 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Chrm3Q9ERZ3 589 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Il22bQ9JJY8 179 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Il22Q9JJY9 179 aa9.01□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Kiaa1522A2A7S8 1013 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gm3099J3QPA5 205 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Yipf3Q3UDR8 347 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 BckdhbQ6P3A8 390 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 RimklbQ80WS1 387 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 WrbQ8K0D7 174 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Obp2aQ8K1H9 176 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Fndc5Q8K4Z2 209 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Q9CXL3 195 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 PmpcbQ9CXT8 489 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nit2Q9JHW2 276 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ifi202Q9R002 445 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Wdr33Q8K4P0 1330 aaKnown RBP9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ndor1A2AI05 598 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Vmn2r90E9PXJ8 863 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mroh8E9PYI4 1049 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gm10639E9Q6L7 222 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 CcnkO88874 554 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rab23P35288 237 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tubb4bP68372 445 aaKnown RBP9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rbl1Q64701 1063 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms