RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Epb41P48193 858 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Lim2P56563 173 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hrh2P97292 397 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 ItkQ03526 625 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ano7Q14AT5 859 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Znf235Q61116 645 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Senp5Q6NXL6 749 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr1062Q7TR71 315 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tecpr1Q80VP0 1166 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Clec2eQ80XD9 204 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Mppe1Q80XL7 396 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn1r79Q8R285 306 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 ClmpQ8R373 373 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Smg8Q8VE18 991 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Lyrm1Q9CQB7 122 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Syvn1Q9DBY1 612 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Scamp5Q9JKD3 235 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slfn2Q9Z0I6 378 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm5145F8VQ88 278 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 P01670 111 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 P01671 111 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 P01672 111 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Got2P05202 430 aaKnown RBP9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Clec4fP70194 548 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tespa1Q3U132 458 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ceacam5Q3UKK2 947 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fam83fQ3UKU4 495 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rnf145Q5SWK7 663 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rasa4Q6PFQ7 802 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ric8bQ80XE1 520 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rbm22Q8BHS3 420 aaKnown RBP9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 TpbglQ8C013 384 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ppa2Q91VM9 330 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Q922R1 422 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Anxa13Q99JG3 317 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Eef1akmt2Q9D853 244 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Itgb1bp2Q9R000 350 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Adam17Q9Z0F8 827 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Wfdc16A2A5H4 111 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm2832F7AEC7 200 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Akain1G3UWD5 69 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cldn5O54942 218 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fam167bP17257 162 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hmx2P43687 273 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Igfbp4P47879 254 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Apobec1P51908 229 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gucy2eP52785 1108 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rpl26P61255 145 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Arcn1Q5XJY5 511 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 GpamQ61586 827 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Has1Q61647 583 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nrg1Q6DR99 700 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Q6GQU0 248 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Serpina12Q7TMF5 413 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Kcng4Q80XM3 506 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Psd4Q8BLR5 1005 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Kank2Q8BX02 843 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ttc34Q8C0Q3 554 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slc46a2Q8CA03 479 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sh3d19Q91X43 789 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cyp4v2Q9DBW0 525 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rhox9Q9EQM5 227 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cngb3Q9JJZ9 694 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zscan4eA0A1B0GRE8 505 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm5485A0A1D5RM98 91 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm3259D3YUK0 475 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ccdc62E9PVD1 701 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmigd3G3X8R9 209 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Mup5P11591 180 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Jak1P52332 1153 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Adra1dP97714 562 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sdr16c6Q05A13 316 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm1604bQ3TRG0 118 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hbq1bQ3U0A6 142 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nr1h2Q60644 446 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Caprin1Q60865 707 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Atp6v1g3Q8BMC1 118 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 TiparpQ8C1B2 657 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zswim3Q8CFL8 695 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 GcshQ91WK5 170 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rxfp2Q91ZZ5 737 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cybrd1Q925G2 290 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fuca1Q99LJ1 452 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pmf1Q9CPV5 202 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ppp6cQ9CQR6 305 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vps28Q9D1C8 221 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 NvlQ9DBY8 855 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dpp7Q9ET22 506 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 CtsmQ9JL96 333 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cyb561d2Q9WUE3 222 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Racgap1Q9WVM1 628 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zscan12Q9Z1D7 501 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Kdelc2G5E897 503 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Atn1O35126 1175 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Il1rl1P14719 567 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dpep1P31428 410 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pcsk1P63239 753 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tial1P70318 392 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ncf4P97369 339 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 OxtrP97926 388 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms