RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gucy1a3Q9ERL9 691 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Clec4aQ9QZ15 238 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Znf683I7HJS4 458 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Il13ra1O09030 424 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ca3P16015 260 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Hk1P17710 974 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ssr4Q62186 172 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Tpp2Q64514 1262 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Stkld1Q80YS9 662 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Cplx3Q8R1B5 158 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Lrrc8cQ8R502 803 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Oas1cQ924S2 362 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Usp11Q99K46 921 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ecrg4Q99LS0 148 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Lrrc34Q9DAM1 415 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 PodxlQ9R0M4 503 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 CflarO35732 481 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 P01670 111 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 P01671 111 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 P01672 111 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ptger3P30557 365 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Slc16a1P53986 493 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 PhbP67778 272 aaKnown RBP23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 XiapQ60989 496 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 CcncQ62447 283 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Znf280cQ6P3Y5 742 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Deup1Q7M6Y5 601 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Zfp595Q8BIN6 625 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Sh3rf2Q8BZT2 735 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Fam204aQ8C6C7 236 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 GrpQ8R1I2 146 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Lrrc3bQ8VCH9 259 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rmi1Q9D4G9 616 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Efcab9Q9DAM2 216 aa23.09■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gm13285B1AYI3 182 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gm13275B1AYI8 182 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Slc2a7P0C6A1 513 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Colec11Q3SXB8 272 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 HecaQ3V1N5 544 aaKnown RBP23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Timm29Q8BGX2 266 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 IfnzQ8BQT1 182 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gm13278Q8CD73 182 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Nup85Q8R480 656 aaKnown RBP23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Smyd2Q8R5A0 433 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Atg13Q91YI1 516 aa23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 NtpcrQ9CQA9 190 aaKnown RBP23.08■■□□□ 1.29
Upf3a-201ENSMUST00000043767 PtproE9Q612 1226 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Gm8257E9Q8R3 264 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Spin2fJ3QPU0 254 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Vmn2r54K7N649 806 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 GemP55041 295 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Mrps6P58064 125 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Fam72aQ8BFZ8 149 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Znf76Q8BMU0 568 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 KmoQ91WN4 479 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Mrps18aQ99N85 196 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Fhl5Q9WTX7 284 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 RlfA2A7F4 1918 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Gm4450E9Q007 373 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rc3h2P0C090 1187 aaKnown RBP23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ptpn22P29352 802 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Fgf13P70377 245 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Garnl3Q3V0G7 1038 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rnf215Q5SPX3 379 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Hsd3b4Q61767 373 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Creb3Q61817 404 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Hbs1lQ69ZS7 682 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ints6Q6PCM2 883 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 TdrpQ8C5P7 182 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rfx6Q8C7R7 927 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ttc39cQ8VE09 580 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Adgrf1Q8VEC3 908 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Olfr665Q8VG79 316 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Cldnd1Q9CQX5 253 aa23.07■■□□□ 1.28
Upf3a-201ENSMUST00000043767 NmbrO54799 390 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Slc22a2O70577 553 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Adcy1O88444 1118 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Gpatch4Q3TFK5 415 aaKnown RBP23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Fam35aQ3UEN2 891 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ccdc185Q3V118 621 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rap1gap2Q5SVL6 712 aaKnown RBP23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Grid1Q61627 1009 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Lingo3Q6GQU6 589 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Orai3Q6P8G8 290 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rpp38Q80UU2 280 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Frmd4aQ8BIE6 1020 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Proser2Q8C5R2 471 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Fcho1Q8K285 873 aa23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Dnajb1Q9QYJ3 340 aaKnown RBP23.06■■□□□ 1.28
Upf3a-201ENSMUST00000043767 SpaarA0A1B0GSZ0 75 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Gm13089A2AGW7 455 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Lrriq4A6H6A4 596 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Anxa8O35640 327 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ephx3Q3V1F8 367 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Trcg1Q58Y74 825 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Nomo1Q6GQT9 1214 aaKnown RBP23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Amer3Q6NS69 780 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Pnma8aQ80VM8 430 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 CenpuQ8C4M7 410 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 MmaaQ8C7H1 415 aa23.05■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms