RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 PrkciQ62074 595 aaKnown RBP11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Armcx2Q6A058 784 aaKnown RBP11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dcaf15Q6PFH3 600 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc16a9Q7TM99 508 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ireb2Q811J3 963 aaKnown RBP11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dis3lQ8C0S1 1053 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slco6c1Q8C0X7 706 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gsg1Q8R1W2 324 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Isoc1Q91V64 297 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fig4Q91WF7 907 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm36028A0A0U1RPM1 299 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pcsk6F6XJP7 959 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 GsrP47791 500 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hmgcs2P54869 508 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tmem63bQ3TWI9 832 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tnfaip2Q61333 691 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Naa50Q6PGB6 169 aaKnown RBP11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mrps35Q8BJZ4 320 aaKnown RBP11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hacd3Q8K2C9 362 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Acap1Q8K2H4 740 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Olfr330Q8VGD9 315 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Trim33Q99PP7 1142 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Zmat2Q9CPW7 199 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slco1c1Q9ERB5 715 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 H2afyQ9QZQ8 372 aaKnown RBP11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm28363A0A087WQW2 129 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 4921501E09RikA0A0R4J054 908 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Olfr839-ps1A0A1D5RMH6 312 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Znf683I7HJS4 458 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mllt10O54826 1068 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 ChgbP16014 677 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Htr2cP34968 459 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 UcmaQ14BU0 138 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Zbtb48Q1H9T6 681 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hsdl2Q2TPA8 490 aaKnown RBP11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Q5EBG8 199 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rbbp7Q60973 425 aaKnown RBP11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ifit3Q64345 403 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Taf1cQ6PDZ2 836 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dlgap3Q6PFD5 977 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Klhl17Q6TDP3 640 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rad9bQ6WBX7 403 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Trit1Q80UN9 467 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tecpr1Q80VP0 1166 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hspa13Q8BM72 471 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Nmur2Q8BZ39 395 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 AA792892Q8C6S1 278 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Atxn7l2Q8C8K6 696 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 OoepQ9CWE6 164 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 S100a14Q9D2Q8 104 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Q9D9D9 101 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Nhsl1Q8CAF4 1587 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cyp2b13A6H6J2 491 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Aff2O55112 1272 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Lrrc74bQ14BP6 391 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pag1Q3U1F9 429 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Vars2Q3U2A8 1060 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Got1l1Q7TSV6 404 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 GmppbQ8BTZ7 360 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gipc2Q9Z2H7 314 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cacna1dQ99246 2179 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Top6blJ3QMY9 579 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rdh7O88451 316 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ctbp1O88712 441 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Adamts10P58459 1104 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Zmat1Q3V0C1 714 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mfsd3Q5U419 412 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pcsk7Q61139 770 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Aldh1a2Q62148 518 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Six3Q62233 333 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 GancQ8BVW0 898 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 RtknQ8C6B2 564 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fam160b1Q8CDM8 764 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 PlgrktQ9D3P8 147 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tubb3Q9ERD7 450 aa11.4□□□□□ -0.58
Topbp1-201ENSMUST00000035164 PepdQ11136 493 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Hdgfl2Q3UMU9 669 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Trim40Q3UWA4 246 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Rnf38Q8BI21 518 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Rmdn2Q8BSE0 410 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 LipmQ8K2A6 422 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 ZwilchQ8R060 589 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Prmt3Q922H1 532 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Syde1Q9DBZ9 737 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ninj2Q9JL89 143 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Stap1Q9JM90 297 aaKnown RBP11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Bmp15Q9Z0L4 392 aa11.4□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gm21083A0A0G2JFD5 256 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Socs2O35717 198 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 P01740 135 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Cbx2P30658 519 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Foxk1P42128 719 aaKnown RBP11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 IqcmQ149I8 489 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Pacs2Q3V3Q7 862 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tigd3Q7TM95 470 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Olfr212Q7TS33 327 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Mis18bp1Q80WQ8 998 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Q80Y73 168 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Klhl26Q8BGY4 606 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Aste1Q8BIR2 672 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms