RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Fbxo16Q9QZM9 334 aa10.9□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tmem115Q9WUH1 350 aa10.9□□□□□ -0.67
Ciita-201ENSMUST00000023147 Cntnap5cQ0V8T7 1305 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tnks1bp1P58871 1720 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ect2lA0A140LIP2 953 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Slc9a5B2RXE2 898 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ttc7bE9Q6P5 843 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ptch2O35595 1182 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 AlplP09242 524 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 RxraP28700 467 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Apba2P98084 750 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Nat8lQ3UGX3 299 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Zdhhc18Q5Y5T2 380 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 ChpfQ6IQX7 774 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fam126aQ6P9N1 521 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Klhl6Q6V595 619 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 HpseQ6YGZ1 535 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Mapkap1Q8BKH7 522 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Clic5Q8BXK9 251 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rfwd3Q8CIK8 774 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 PolbQ8K409 335 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gprc5bQ923Z0 410 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Sesn3Q9CYP7 492 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rnf128Q9D304 428 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ssr3Q9DCF9 185 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Mpp6Q9JLB0 553 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Stap1Q9JM90 297 aaKnown RBP10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rpl9-ps1S4R1R7 191 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gm5145F8VQ88 278 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Etv6P97360 485 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Slc29a2Q61672 456 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Slc26a2Q62273 739 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rad9bQ6WBX7 403 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Pan2Q8BGF7 1200 aaKnown RBP10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Mcm8Q9CWV1 833 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Erp27Q9D8U3 272 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tbkbp1A2A9T0 611 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gm17555F6U8B9 371 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ccdc149F6V035 524 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rgsl1H3BL40 1073 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Cdc42P60766 191 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Lpar1P61793 364 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ugt1a2P70691 533 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Creb1Q01147 341 aaKnown RBP10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Q5EBG8 199 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 OgdhQ60597 1023 aaKnown RBP10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rbm34Q8C5L7 375 aaKnown RBP10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 CpzQ8R4V4 654 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Snapc2Q91XA5 359 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Zfp61Q923D1 555 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 CabyrQ9D424 453 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Itih4A6X935 942 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tnk2O54967 1055 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 SagP20443 403 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rpl3P27659 403 aaKnown RBP10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Clcn3P51791 818 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Sh3rf3Q8C120 878 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Leg1Q8C6C9 337 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Teddm1bQ8CC62 306 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Slc22a19Q8VCA0 551 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Plbd1Q8VCI0 550 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Dhx36Q8VHK9 1001 aaKnown RBP10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tex22Q9D9U4 189 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Pou5f2Q9DAC9 329 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Armc8Q9DBR3 673 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Smpd3Q9JJY3 655 aa10.89□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gm13078A2AGW8 474 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Pramef17A2ASJ1 475 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 MrasO08989 208 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Cct3P80318 545 aaKnown RBP10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Scn1bP97952 218 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Spink5Q148R4 1017 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rnf44Q3UHJ8 407 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Stxbp5lQ5DQR4 1185 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Kansl1lQ5DTI6 991 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Hbs1lQ69ZS7 682 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Lrrc15Q80X72 579 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Asz1Q8VD46 475 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Hdhd5Q91WM2 419 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Nphs2Q91X05 385 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Actr3Q99JY9 418 aaKnown RBP10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fam227bQ9D518 532 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Myh3P13541 1940 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Dhtkd1A2ATU0 921 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Akirin2B1AXD8 201 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 LtfP08071 707 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 BpgmP15327 259 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Atp6v0d1P51863 351 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Pdcd5P56812 126 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 NfycP70353 335 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Mbtd1Q6P5G3 631 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rnf220Q6PDX6 566 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Slc25a12Q8BH59 677 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rab36Q8CAM5 267 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gstm4Q8R5I6 218 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Kiaa2013Q91X21 634 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 MthfrQ9WU20 654 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tsc22d3Q9Z2S7 137 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Olfr220E9Q050 325 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 4933408B17RikG3X9B4 273 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms