RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Mmp1aQ9EPL5 464 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Nfs1Q9Z1J3 459 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Cnot1Q6ZQ08 2375 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 RlfA2A7F4 1918 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 OtofQ9ESF1 1997 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Gpr179E9PY61 2293 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Auts2A0A087WPF7 1261 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Cilp2D3Z7H8 1162 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Kcng2F7A6P6 480 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Trim30aP15533 496 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Serpina3cP29621 417 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Hnrnpa1P49312 320 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Npas2P97460 816 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Fmo3P97501 534 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Gabpb1Q00420 383 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Pde1bQ01065 535 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Tie1Q06806 1134 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Cep76Q0VEJ0 659 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 4930502E18RikQ14BQ3 236 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Gpatch4Q3TFK5 415 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Tmem184cQ3TPR7 525 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Pid1Q3UBG2 217 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ephx3Q3V1F8 367 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Zfp36l3Q5ISE2 725 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Spata48Q5NC83 441 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 CtifQ6PEE2 600 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Tra2aQ6PFR5 281 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Dclk2Q6PGN3 756 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Fam185aQ7TPD2 378 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Pak5Q8C015 719 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ccdc137Q8R0K4 290 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Zdhhc12Q8VC90 267 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Olfr1502Q8VG66 316 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ndufs1Q91VD9 727 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ubap2Q91VX2 1132 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Arhgef3Q91X46 524 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Fcf1Q9CTH6 198 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 MceeQ9D1I5 178 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Prpf4Q9DAW6 521 aaKnown RBP11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Csnk1dQ9DC28 415 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Dnajb8Q9QYI7 227 aa11.01□□□□□ -0.65
Tubb1-201ENSMUST00000016399 AcacbE9Q4Z2 2448 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Pcm1Q9R0L6 2025 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Cyp2w1E9Q816 493 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Vmn2r39L7N2E5 861 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Gm3488M0QW81 238 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 MttpO08601 894 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Diaph2O70566 1098 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ctbp1O88712 441 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 IghgP01863 330 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 PlauP06869 433 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Cdh1P09803 884 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Becn2P0DM65 447 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 ItgavP43406 1044 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Top1Q04750 767 aaKnown RBP11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Pecam1Q08481 727 aaKnown RBP11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Gdpd4Q3TT99 632 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 B3gntl1Q3U129 357 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Zfp235Q499D5 702 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 ADGRF3Q58Y75 991 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Taar8aQ5QD07 344 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Pde1aQ61481 565 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Pick1Q62083 416 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 TifaQ793I8 184 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Xylt1Q811B1 953 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Phactr3Q8BYK5 558 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Lrrtm3Q8BZ81 582 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Vps18Q8R307 973 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 PlvapQ91VC4 438 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Xpo6Q924Z6 1125 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 CoprsQ9CQ13 173 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 4930548H24RikQ9D496 437 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Rpn2Q9DBG6 631 aaKnown RBP11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Tmem174Q9DCX7 243 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 PyglQ9ET01 850 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 RhoaQ9QUI0 193 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Rad1Q9QWZ1 280 aa11□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Sptbn4E9PX29 2561 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Gm13101A2ASJ0 481 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Zfp780bE9Q2S6 806 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Zfp169E9Q3R6 731 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Gabrg2P22723 474 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 FurinP23188 793 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ccna2P51943 422 aaKnown RBP10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Snrpd1P62315 119 aaKnown RBP10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 PrkcgP63318 697 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 InscQ3HNM7 579 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Colec11Q3SXB8 272 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 FaxcQ3UMF9 409 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Cep295nlQ497N6 533 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ndufaf2Q59J78 168 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Mtus1Q5HZI1 1210 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Ccdc157Q5SPX1 718 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Itga7Q61738 1179 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 GkQ64516 559 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Tspyl5Q69ZB3 406 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Atg16l2Q6KAU8 623 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Nudcd1Q6PIP5 582 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 Syt14Q7TN84 555 aa10.99□□□□□ -0.65
Tubb1-201ENSMUST00000016399 LnpkQ7TQ95 425 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms