RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Sept6Q9R1T4 434 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Magea1O89006 320 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gabpb1Q00420 383 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mettl17Q3U2U7 461 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Atxn7l3bQ3UD01 97 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Dennd2cQ6P9P8 914 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 RimklaQ6PFX8 380 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Krt75Q8BGZ7 551 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ankrd52Q8BTI7 1076 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Trpv3Q8K424 791 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mrpl58Q8R035 206 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 CarfQ8VHI4 689 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Atp13a2Q9CTG6 1169 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cyb5r1Q9DB73 305 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Plod3Q9R0E1 741 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Magea2Q9R2A2 320 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tbk1Q9WUN2 729 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Bag6Q9Z1R2 1154 aaKnown RBP17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Btbd35f21A0A140T8Q5 498 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cyb5rlB1AS42 316 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Vmn2r14E9Q759 848 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Btbd35f22J3QN64 498 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mov10P23249 1004 aaKnown RBP17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Vps4bP46467 444 aaKnown RBP17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ptcd3Q14C51 685 aaKnown RBP17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Btnl1Q7TST0 509 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Samd4bQ80XS6 687 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fam83eQ80XS7 481 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Frs2Q8C180 508 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 TbcelQ8C5W3 424 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Parp9Q8CAS9 866 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Nxf1Q99JX7 618 aaKnown RBP17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mat2bQ99LB6 334 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Abcg8Q9DBM0 673 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Trpc7Q9WVC5 862 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Btbd35f28A2CFD5 498 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Zfp963D3Z2T8 383 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ces1bD3Z5G7 567 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Taf4E9QAP7 1042 aaKnown RBP16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Btbd35f30J3QML3 498 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 RbpjlO08674 515 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Sema6aO35464 1031 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tuba3aP05214 450 aaKnown RBP16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 NadkP58058 439 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Eif2ak2Q03963 515 aaKnown RBP16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Stx5Q8K1E0 355 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Crtc3Q91X84 619 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tfap2dQ91ZK0 452 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Q9D3J9 298 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ssxb8B1AY40 170 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Taf1cQ6PDZ2 836 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Adgrd1Q80T32 903 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cabcoco1Q8CDT7 208 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mta1Q8K4B0 715 aaKnown RBP16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Msi2Q920Q6 346 aaKnown RBP16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Slco1c1Q9ERB5 715 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fkbp9Q9Z247 570 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Keap1Q9Z2X8 624 aaKnown RBP16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 SrcapA0A087WQ44 3271 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Arhgap36B1AUC7 590 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mtx3D3YTP3 312 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Slc12a1P55014 1095 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fbxo39Q5NBU5 443 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr703Q9EPF5 319 aa16.99■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm5751A2AHC8 147 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ttll11A4Q9F4 727 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Adamts14E9PX39 1209 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gpatch4Q3TFK5 415 aaKnown RBP16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cd180Q62192 661 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ppp1r3eQ8BRJ4 279 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tmc7Q8C428 726 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Asb7Q91ZU0 318 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Nuf2Q99P69 463 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Snrpb2Q9CQI7 225 aaKnown RBP16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Q9DAD0 168 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gjd2O54851 321 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Msr1P30204 458 aaKnown RBP16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Pfdn4Q3UWL8 134 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tatdn1Q6P8M1 295 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Spata20Q80YT5 790 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Wdr59Q8C0M0 992 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 ScaiQ8C8N2 606 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Nrbf2Q8VCQ3 287 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Itgb3bpQ9CQ82 176 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Idh3aQ9D6R2 366 aaKnown RBP16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Syvn1Q9DBY1 612 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Trpv2Q9WTR1 756 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Rfc2Q9WUK4 349 aaKnown RBP16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm43951A0A0N4SUT6 962 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Slc4a11A2AJN7 862 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Dmp1O55188 503 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Hmx2P43687 273 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Supt20hQ7TT00 530 aaKnown RBP16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fbxw21Q8BI38 468 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Nsl1Q8K305 281 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Kctd11Q8K485 232 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 MydgfQ9CPT4 166 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 TrirQ9D735 173 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Efhd2Q9D8Y0 240 aaKnown RBP16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 PollQ9QXE2 573 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms